Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151530g00004 ATGTTGGCGTTGTCGAGAAAGATCCAACTGCGCGATATGTTCGGATATAAGGCGTTCGATGAAGTAGATGGAATAGAAGTGGCGTGGAACCAAGTCAACGTTGAGGATTTTTTGCAGTCACCGCAACAATTGGAAAGATTGTACTCTGAGGTTCATTTCCTCAAGTCATTGAAACATGAGAATATCATCAAATTCTACAATTCTTGGGTCGATGAAAAGACCCGGACTATCAACATCATCACCGAGTTGTTTACCTCCGGGAGTTTGAGGCAATATAGAAAGAAACACAAGAATATTGATATGAAAGCCATGAAGAACTGGTCGCGGCAGATTCTTCAAGGATTGTGCTATCTGCATGGCCATAATCCTCCCATAATTCATAGGGATCTGAAATGTGATAACATTTTTGTCAACGGTAATACTGGACGTGTTAAGATTGGAGATCTTGGATTGGCAGTTGTGATGCAGCAGCCTCTTGCTCACAGTGTTATAGGCACACCAGAATTTATGGCGCCAGAGCTTTATGAAGAACAATACAATGAACTTGTTGACATATATTCTTTTGGCATGTGTTTGTTGGAAATGGTCACTTGTGAATACCCATATAGTGAATGTAGAAATCCGGCACAGATATATAAGAAAGTTACCTCTGGTATAAAGCCTGCCGCCCTTTCTAAAGTAAATAATTTGAAATTGAGGGAATTTATTGAGAAGTGTCTAGTTCCAGCATCTATGCGACTGTCGGCATCTGAACTATTGAAAGATCCATTCCTTGTTGCTGAAAGCCCGAAGGAGATCAATCATGATACACTACTGCAGCTGACTAATCTGCCAATATCTGAGCCTTATCCCATGGAGATAGACTCAAGCTCCAGGCATACTTCACATGGTTCCTCTGTGAAAAGAATGGAAGAAACTTCCCTAGTTTCAGTATTTGATCTTCTACAGGAGACTGAGAAAAATGAATTCAGGTTAAGAGGAGATAAAACTGCTGGTGGTACATTTTCACTTACCCTGCGAATTGCCGATGCGCATGGTCGAGCAAGGAATATCCATTTTCCGTTTTATGTCCATTCTGACACGGCAATTTCAATTGCTGTGGAAATGGTTGAACACCTGGGACTTGCGAATGATGATGTAACTGTCATTGCCGAGCTAATACACAACATGATTCTGAAGCTCACGTCCAACTCGAAACCATCCTCTTATAACTTCTCATCTGGAGGAGCTCACTTGCACAAGCCTTCGGAAGATCTTCAGAGCCGTGGAACATCAAGTTGCCAGTGGCCATCGCTATCAAGTGTTTTTGATACAAAAGCAATTCAAGATGATTATGTTCACTTACATGATGATGGAGAAGATCATTATAAACAAGAATCTGTTATGTCAGAGATTTCATCAGAGTATGGGACTGCACTTGCTTTGGATTCTAAGAGCGAAGAGCATGATATTTTTAGTATGGACGGATGCTGCAAAGGTTCCAATGGCTTCATTACCAATTCAGATGCCAGATTCTGTGCTCATGATGATAATGAACAAAAGAATGACGTTGACGAATCAGAGAACTCAGCAGGCATTTTAATCAATTCACAATGCAGTGCATTCGAAAACTTTGACGTGTCGAGCATATGTTCCCTTACTCTAGGCGACATAGATAATTCAACTGATCTGCAGCTGGAGCTTGATGCAATAGAAACGCAGTATCACCAATGTTTTCGCGAGCTCGTGAAGATGAGGGAGGATGCCATAGAAAACGCCAAAAGGAGGTGGATAACAAGGAAGAAAATATCAGTTATGTGA 1800 0.4122 MLALSRKIQLRDMFGYKAFDEVDGIEVAWNQVNVEDFLQSPQQLERLYSEVHFLKSLKHENIIKFYNSWVDEKTRTINIITELFTSGSLRQYRKKHKNIDMKAMKNWSRQILQGLCYLHGHNPPIIHRDLKCDNIFVNGNTGRVKIGDLGLAVVMQQPLAHSVIGTPEFMAPELYEEQYNELVDIYSFGMCLLEMVTCEYPYSECRNPAQIYKKVTSGIKPAALSKVNNLKLREFIEKCLVPASMRLSASELLKDPFLVAESPKEINHDTLLQLTNLPISEPYPMEIDSSSRHTSHGSSVKRMEETSLVSVFDLLQETEKNEFRLRGDKTAGGTFSLTLRIADAHGRARNIHFPFYVHSDTAISIAVEMVEHLGLANDDVTVIAELIHNMILKLTSNSKPSSYNFSSGGAHLHKPSEDLQSRGTSSCQWPSLSSVFDTKAIQDDYVHLHDDGEDHYKQESVMSEISSEYGTALALDSKSEEHDIFSMDGCCKGSNGFITNSDARFCAHDDNEQKNDVDESENSAGILINSQCSAFENFDVSSICSLTLGDIDNSTDLQLELDAIETQYHQCFRELVKMREDAIENAKRRWITRKKISVM 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151530g00004 599 ProSiteProfiles Protein kinase domain profile. 1 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151530g00004 599 FunFam probable serine/threonine-protein kinase WNK9 84 263 - -
Stsc151530g00004 599 Gene3D Transferase(Phosphotransferase) domain 1 84 264 - -
Stsc151530g00004 599 Gene3D - 333 419 - -
Stsc151530g00004 599 CDD STKc_WNK 16 258 - -
Stsc151530g00004 599 SMART serkin_6 8 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151530g00004 599 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 16 492 - -
Stsc151530g00004 599 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 336 391 IPR024678 GO:0004674|GO:0005524
Stsc151530g00004 599 Gene3D Phosphorylase Kinase; domain 1 13 82 - -
Stsc151530g00004 599 SUPERFAMILY Protein kinase-like (PK-like) 16 292 IPR011009 -
Stsc151530g00004 599 FunFam Probable serine/threonine-protein kinase WNK1 11 82 - -
Stsc151530g00004 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Stsc151530g00004 599 Pfam Protein kinase domain 16 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151530g00004 Stsc-Chr151530 18267 21912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151530g00004 6 598 MAP Kinase Kinase Kinase AT5G41990 49.503 2.10e-179 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc151530g00004 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151530g00004 K08867 - gmx:100783717 761.911