Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151529g00003 ATGTTGCCGCATCCAAACGTGGCATCCATACTAAGAAGCATAACAACATTGTTACTGCGTCCGCCAAGAATGCTCTCGCCGTCACCGCCGTCGCCGCCTTCTTTCTCCGCAGCCCCCTCGGAAACAATGTTACCATCGTCCCTCTCCGCCTCACCTTCCAAGTCTTCATTCCACCACTTCCCTATCTCTTCCACATCCTCAAGCTCTCACACACTTCACACCACAATGACCTGTTCCAATTCCAAGTGCTTCTTCTCCTCTGCGAACACCACAACTCCGATTGACATATCGGCGATGAACCGAACCGAGAATACTGAACCCGAACCCGACGTGGATGGGTCTCTGGTGGTGGTTTCGTTCTACAAGTTCGCGGATTTCTCTGACCATGCATCTATGAGGAAACCCTTGAAGGAGCTTTGCCAACAACTTCGTGTTTCAGGTGGTATTATTCTTGCACCTGAAGGGATCAATGGCAGCATATGTGGCACTCGAGAGTCGGTGGAGAAAGTTCTTGCATTCATACAAAGTGATGACCGACTGAGAGGGCTAAGACGTGTTGAATCGCCTGTTAGTCCCGAGGAGGAAGCCATTCACCATGGACACAGTGTCAGTTCTCCTCTTGCTGCAGGGGAAGATGCACCTTTCCGGTGGGATCACGTGAGGGTCAAATTGAAGAAAGAGATTGTCACGCTCGGGATGCCTAGCGTATCACCTATTGAAAAGGTTGGGAAATATGTTGGCCCAAAAGAGTGGAATGCTTTGATTAGTGATCCAGATACGGTTGTGATTGATGTGAGGAATAAGTATGAGACCAGAATAGGAAAGTTCAAAGGAGCAGTTGATCCTTGTACTACATCATTTCGAGAATTCCCCTCTTGGGTGGAGGAGCATTTCCGGCTTACTGGATGTGGGCTTCTGGAAGTTGAGGTAAATAATTCCGTTGAAAGTTATGAAAATGAAGTGGAGAATCCAAAACAAAATATGCCAAAACGTGTCGCGATGTATTGCACCGGAGGTATTCGATGCGAGAAAGCTACAAGTCTACTTCTCAGAAAAGGTTTCGAAGAGGTTTATCACCTTGAAGGTGGAATCCTGAAATATCTTGAAGAGGTTCCAGAGAAACAGAGCCTCTGGGAGGGTGAGTGCTTTGTCTTTGACAAGCGAGTCTCAGTTGAGCACGGGTTGGTGCCGGGAAGCTTCAAGCTCTGCTATGGTTGCAAGCAGCCTGTGAGTGATGCTGACATGGAAGCCCCCGAGTATGAATATGGGGTTTCTTGTCCTTACTGCTTTTCATCGAAATCAGAAGAAGAGATGGAGAGGGCTCGTGCCCGACATCGACAATTTGAGAGATGGGGAATCATAGGCGGTCCAGATAAGGGTCGCCGGCCATCAAGTAAACCAGACAGTGGCCGTGCAAAACCAAACCAACATTCCCGTTCCATCTAA 1446 0.4848 MLPHPNVASILRSITTLLLRPPRMLSPSPPSPPSFSAAPSETMLPSSLSASPSKSSFHHFPISSTSSSSHTLHTTMTCSNSKCFFSSANTTTPIDISAMNRTENTEPEPDVDGSLVVVSFYKFADFSDHASMRKPLKELCQQLRVSGGIILAPEGINGSICGTRESVEKVLAFIQSDDRLRGLRRVESPVSPEEEAIHHGHSVSSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPSVSPIEKVGKYVGPKEWNALISDPDTVVIDVRNKYETRIGKFKGAVDPCTTSFREFPSWVEEHFRLTGCGLLEVEVNNSVESYENEVENPKQNMPKRVAMYCTGGIRCEKATSLLLRKGFEEVYHLEGGILKYLEEVPEKQSLWEGECFVFDKRVSVEHGLVPGSFKLCYGCKQPVSDADMEAPEYEYGVSCPYCFSSKSEEEMERARARHRQFERWGIIGGPDKGRRPSSKPDSGRAKPNQHSRSI 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151529g00003 481 ProSiteProfiles Rhodanese domain profile. 256 376 IPR001763 -
Stsc151529g00003 481 MobiDBLite consensus disorder prediction 452 481 - -
Stsc151529g00003 481 MobiDBLite consensus disorder prediction 452 468 - -
Stsc151529g00003 481 Pfam Rhodanese-like domain 248 369 IPR001763 -
Stsc151529g00003 481 Hamap tRNA uridine(34) hydroxylase [trhO]. 113 413 IPR020936 -
Stsc151529g00003 481 Gene3D - 230 409 IPR036873 -
Stsc151529g00003 481 Gene3D - 103 229 - -
Stsc151529g00003 481 MobiDBLite consensus disorder prediction 22 50 - -
Stsc151529g00003 481 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 106 441 IPR020936 -
Stsc151529g00003 481 SMART rhod_4 246 373 IPR001763 -
Stsc151529g00003 481 CDD RHOD_YceA 243 369 - -
Stsc151529g00003 481 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 225 402 IPR036873 -
Stsc151529g00003 481 Pfam UPF0176 acylphosphatase like domain 116 228 IPR040503 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151529g00003 Stsc-Chr151529 20925 24731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151529g00003 75 475 Sulfurtransferasese or Rhodanese AT2G40760 72.660 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151529g00003 - - gmx:100784854 635.95