Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151527g00004 ATGGATGTGGGGCGGTCACAGAGCGATGAAGCGGAAGAGTCAAGTGGCTATCAATCAATTGACTCTAATTCTAGTAGCGAATTGCCTGAGGGTGGCACCGATTTATCTCCGGGGACTGGTGAGGTCGGTGTAGATGAAAGTTACACGACGATAAACTTGGATTCGGAAGAACCTGAGGGAATTGGGGGAGCCTTCAAGTGTGTAGAGGATTTCGCGGGGAAGGAATTTGCATCGGAGGAGGAAGCCCTGGATGCCTACAAGGCCTTTGCAAGGTTTAGGGGTTTTGGCGTGAGGAAAGGAGACATAGGCCGCGTAAACGGCGTTGTTGTGAGACGGGACTTCTTTTGTCACCGCCATGGACTCAGGAGAGCGATCCACTACGACCGTCCGGACAGGATGAGGCAGGAGAAGATGGAGACTCGGACGGATTGCAAGGCAAGGATGAAGAATTTCATGGAGATGATGCTGAAGAGTTTTGAGGCTCTCCAGGCCAGAGTGGATGAGGGGTTCGCAAAGATAACGGACCGTATAGACAGCATCGACATTTCTCTGATCAGCCAGGCCGAGGAGATGCGGATGCTTCGGGACAGATTCCTCGAGTTGGTTGGTGAGGTCCCTCCGACTACAGAGCCCACAGCAGAGGCTCCAACAGAGGTTGATGAGGTCACGAGGACCGATGATCCTACGGCTGAGGATGGTACGGAGGTCGCTCCGGTAGTTGCAGATCAGGGTGAGGGTGTTCAGGCAGCCACGGAGACTACCGAGGTTGTACAGGAGCAATCCGTTGAGTCGCCGGCACATGATTGA 807 0.539 MDVGRSQSDEAEESSGYQSIDSNSSSELPEGGTDLSPGTGEVGVDESYTTINLDSEEPEGIGGAFKCVEDFAGKEFASEEEALDAYKAFARFRGFGVRKGDIGRVNGVVVRRDFFCHRHGLRRAIHYDRPDRMRQEKMETRTDCKARMKNFMEMMLKSFEALQARVDEGFAKITDRIDSIDISLISQAEEMRMLRDRFLELVGEVPPTTEPTAEAPTEVDEVTRTDDPTAEDGTEVAPVVADQGEGVQAATETTEVVQEQSVESPAHD 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151527g00004 268 MobiDBLite consensus disorder prediction 10 32 - -
Stsc151527g00004 268 MobiDBLite consensus disorder prediction 205 268 - -
Stsc151527g00004 268 MobiDBLite consensus disorder prediction 247 261 - -
Stsc151527g00004 268 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 19 149 - -
Stsc151527g00004 268 MobiDBLite consensus disorder prediction 1 46 - -
Stsc151527g00004 268 MobiDBLite consensus disorder prediction 217 231 - -
Stsc151527g00004 268 Pfam FAR1 DNA-binding domain 86 149 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151527g00004 Stsc-Chr151527 24171 24977 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151527g00004 FAR1 1.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151527g00004 - - aip:107607194 138.272