Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151524g00004 ATGATGGTTTTGGAGGAGCGAGTTCTGTTTAACGGCGAACATGACGGAGCCGTCAACGGAGCGCAGCCAGTTTCCGCGGCCGCAGACGGCGGCGATGATGGAAAACCGACGGCGAGGCTGCCGCGGTGGACGCGGCAGGAGATCCTGGTGCTAATTCAGGGCAAAACCGACGCCGAGACCAGGTTCCGACCTGGTAGGTCCGCCGTAGGTTCGCCGTCGATCGGTTCTCCGGAGCCGAAGTGGGCGCTGGTATCGTCGTACTGTAAGAAGCACGGCGTGAACCGCGAACCGGTTCAGTGCCGGAAGAGGTGGAGCAACCTCGCCGGCGATTACAAGAAGATCAAGGAGTGGGAGTCTAGGGCAAGGGATGAAACGGAGTCGTTTTGGGTTATGAGGAACGACATGAGGAGGGAGAGAAAGTTACCGGGGTATTTTGATAAGGAGGTGTATGATATACTTGATGCTGCGGTTTCTCCGGCGACGGCCGTGGTTCCGGCGAGTTCTGCAACGGCAGTGAAAGTGGCAGAGGAAGGGGAGGGTGGTGGTGATGCTGAGGTGCACATTTATGACAGTAATAGGAGGGTGGGTGGTGGTGGTGGTGGTGGTGGAGGTGAGGATGGGTTATTCTCTGATTCTGAGAGGGACGAGGTTTTTGTTGCTGCCAATAAGGATGTTCCTACACCTGTTATTCCTATCTCAGCAGAGAAGCAGTATCAACCACTCCAAGGAGAAGGCAATGCTCAAGATGCTACTAATGAGAAACAACCGGCTTCAAATCCGGATTCTACACTTCAAGGGGAACGGAAGAGGAAGCGCTTTGCAACCGATTTGGAGGAAGAAACTCTGCAGAGTCAACTAGTTGATGTCTTAGAAAGAAACGGCCGGATGCTGCGCGATCAACTTGAAACTCAGAACGTCAATTTTCAATTGGATCGGCAGCAGCAAAAAGACACTGCAAGTAACATTGTTGCTGTGCTTGATAAGCTTGCAGATGCTTTAGGAAGAATTGCAGATAAACTATGA 1023 0.5269 MMVLEERVLFNGEHDGAVNGAQPVSAAADGGDDGKPTARLPRWTRQEILVLIQGKTDAETRFRPGRSAVGSPSIGSPEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESRARDETESFWVMRNDMRRERKLPGYFDKEVYDILDAAVSPATAVVPASSATAVKVAEEGEGGGDAEVHIYDSNRRVGGGGGGGGGEDGLFSDSERDEVFVAANKDVPTPVIPISAEKQYQPLQGEGNAQDATNEKQPASNPDSTLQGERKRKRFATDLEEETLQSQLVDVLERNGRMLRDQLETQNVNFQLDRQQQKDTASNIVAVLDKLADALGRIADKL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151524g00004 340 Gene3D - 43 113 - -
Stsc151524g00004 340 Coils Coil 298 318 - -
Stsc151524g00004 340 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 23 340 - -
Stsc151524g00004 340 MobiDBLite consensus disorder prediction 241 263 - -
Stsc151524g00004 340 MobiDBLite consensus disorder prediction 241 268 - -
Stsc151524g00004 340 MobiDBLite consensus disorder prediction 178 210 - -
Stsc151524g00004 340 Pfam Myb/SANT-like DNA-binding domain 42 131 IPR044822 -
Stsc151524g00004 340 CDD GT1 41 115 - -
Stsc151524g00004 340 ProSiteProfiles Myb-like domain profile. 35 108 IPR001005 -
Stsc151524g00004 340 MobiDBLite consensus disorder prediction 15 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151524g00004 Stsc-Chr151524 22026 25547 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151524g00004 42 165 Trihelix Transcription Factor Family AT1G33240 29.231 3.42e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc151524g00004 Myb_DNA-bind_4 4.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151524g00004 - - adu:107486470 466.848