Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151522g00008 ATGGAAAAGATAAGTGTAAAAAGTAGAAGTAGTCAAGCTAAGGTAATGGGAAGCATAATATCAATAGGAGGAGCATTTGTGTTGACTTTCTACAATGGTCCATCTATGACTATGACTATCAGCAACAATTCTCATCATACCAAAATTACCTCATTGCCATCACTTCTTCTTCATCAACCAATTAATATTCTCAAATCAGTGGACACAAATTGGGTCATTGCTGGAATTCTCCTAACTGCTGACTATTTACTGGTTTCATTATGGTACATTTTACAGGTGGATGTATTGAAGGATTACCCAGATGAACTAAGTATGCTGTTCTTTTACAATGTGACTTCAACAATCATATCTGCAATTGTAGGTTCAATCATGGAACCAAATGCAAGTGCTTGGAAGATAAGCCTAGATATTTCATTGCTCTCCATTCTTTGCTCAGGTTTACTTGGAAAATTCTTGAGCAATGCAATATATGCTTGGGTGATACACATAAAAGGGCCAGTGTATGTAACATCATTCAAGCCACTATCAATTGTTATTTCTATTGCCATGGGAGTTATGTTCCTAGGTGACACTCTTTATATTGGAAGTATAATTGGGGCGACAATAATATCAATTGGACTTTACACTGTATTGTGGGGCAAATCAAAAGAAGAGGCAGAGGAAGAGGAAGATGTTATTGGCAATGATAGCCTAGAATCACTAAATAGTGATGAGAATGTTCCATTCTTGCACAGCTGTAACACTCCTTACTCTGAAAAGAAAACAGATAACAATGTGTAA 780 0.3628 MEKISVKSRSSQAKVMGSIISIGGAFVLTFYNGPSMTMTISNNSHHTKITSLPSLLLHQPINILKSVDTNWVIAGILLTADYLLVSLWYILQVDVLKDYPDELSMLFFYNVTSTIISAIVGSIMEPNASAWKISLDISLLSILCSGLLGKFLSNAIYAWVIHIKGPVYVTSFKPLSIVISIAMGVMFLGDTLYIGSIIGATIISIGLYTVLWGKSKEEAEEEEDVIGNDSLESLNSDENVPFLHSCNTPYSEKKTDNNV 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151522g00008 259 SUPERFAMILY Multidrug resistance efflux transporter EmrE 123 216 - -
Stsc151522g00008 259 MobiDBLite consensus disorder prediction 222 259 - -
Stsc151522g00008 259 MobiDBLite consensus disorder prediction 229 259 - -
Stsc151522g00008 259 PANTHER WAT1-RELATED PROTEIN 1 222 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151522g00008 Stsc-Chr151522 31257 33064 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151522g00008 1 245 Nodulin-like Gene Family AT3G28050 42.857 8.73e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151522g00008 - - gmx:100790743 284.263