Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151522g00006 ATGGCAACAAGAATAATTAGAAGATGGTCTTTTTATAGGGACACGCTGCCTGTGATGGTGTTAATTGGGATAGAGTGCAGTGACACTGGTTTGTACACTCTCTTCAAAGCAGCCACAAACACAGGCATGAGTGACCATGTCTTTGTTGCTTATGCTTATGCTCTTGCCACCACTCTCCTCTTTCCTTCCCTCTTCTTTTCCAAAGGATCAAGAGTGGTTCCTCCACTCAGCTTCTCTGTACTAATCAAAATTATCCTTCTTGGCATCATAGGAAGCTCATCACAGGTATTGGGGTATGCTGGAATCAGATACAGCTCTCCAACACTTTCTTCATCAATCGGCAATCTCGTCCCTGCTTTCACCTTCTTGCTTGCCATTATCTTCAGGATGGAAAAGGTAGCTGCAAAGAGCAGAAGTAGCCAAGCAAAGGTAATAGGAAGCATTATATCAATAGCAGGAGCATTTGTAGTTACATTCTACAAAGGTCCTTCTATCAACATTGCTCAAAGGCACCTCTCTTTACAAACTGAGCAACATGTTATTACCATTCTCAATTCAGTTGATACAACTTGGCTCATTGCTGCAACTCTTCTCATAGCTGACTATTTACTTGCTTCATTATGGTACATTTTGCAGGTGGAAATCTTGAAGGTGTACCCTGATGAACTATCTATGGTCTTCTTTTATAATGTCACTGCAACTATTGTGTCAGTAACTATAGCTTTATTCACAGAGAGAAATGCAAGTGATTGGAAAATTGGACTTGACATATCATTGGTCTCCATTGTTTGTTCTATAAGATACCATTAA 810 0.4025 MATRIIRRWSFYRDTLPVMVLIGIECSDTGLYTLFKAATNTGMSDHVFVAYAYALATTLLFPSLFFSKGSRVVPPLSFSVLIKIILLGIIGSSSQVLGYAGIRYSSPTLSSSIGNLVPAFTFLLAIIFRMEKVAAKSRSSQAKVIGSIISIAGAFVVTFYKGPSINIAQRHLSLQTEQHVITILNSVDTTWLIAATLLIADYLLASLWYILQVEILKVYPDELSMVFFYNVTATIVSVTIALFTERNASDWKIGLDISLVSIVCSIRYH 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151522g00006 269 PANTHER WAT1-RELATED PROTEIN 16 265 IPR030184 GO:0016020|GO:0022857
Stsc151522g00006 269 Pfam EamA-like transporter family 30 158 IPR000620 GO:0016020
Stsc151522g00006 269 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151522g00006 Stsc-Chr151522 28067 29975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151522g00006 8 265 Nodulin-like Gene Family AT3G28050 50.193 7.30e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151522g00006 - - gmx:100790743 334.339