Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151522g00005 ATGGCAACAAGAATAATTAGAAGATGGTCTTTTTATAGGGACACGCTGCCTGTGATGGTGTTAATTGGGATAGAGTGCAGTGACACTGGTTTGTACACTCTCTTCAAAGCAGCCACAAACACAGGCATGAGTGACCATGTCTTTGTTGCTTATGCTTATGCTCTTGCCACCACTCTCCTCTTTCCTTCCCTCTTCTTTTCCAAAGGATCAAGAGTGGTTCCTCCACTCAGCTTCTCTGTACTAATCAAAATTATCCTTCTTGGCATCATAGGAAGCTCATCACAGGTATTGGGGTATGCTGGAATCAGATACAGCTCTCCAACACTTTCTTCATCAATCGGCAATCTCGTCCCTGCTTTCACCTTCTTGCTTGCCATTATCTTCAGGATGGAAAAGGTAGCTGCAAAGAGCAGAAGTAGCCAAGCAAAGGGAATATTTGGAAAGTTAATGAGCAATGCAGTTTATGCGTGGGCACTGCACTTGAAAGGAGCTGTGTATGTAACATCATTCAAGCCACTCACAATTGTTATTGCTATTGCCATGGGAGTTATGTTCCTTGGTGATACTCTTCACATTGGAAGTATAATTGGGGCGACAATAATATCAATTGGACTTTACACTGTATTGTGGGGCAAATCAAAAGAGGCAGAGGAAGATGTTGTTGGTAGCCTAGAATCAGTAACTAGTGATGAGAATGTTCCATTGTTGCACAGCTATAACACTCCTTATTACTGTGGAAACAAAAGAGATACCAATGTGTAA 762 0.4199 MATRIIRRWSFYRDTLPVMVLIGIECSDTGLYTLFKAATNTGMSDHVFVAYAYALATTLLFPSLFFSKGSRVVPPLSFSVLIKIILLGIIGSSSQVLGYAGIRYSSPTLSSSIGNLVPAFTFLLAIIFRMEKVAAKSRSSQAKGIFGKLMSNAVYAWALHLKGAVYVTSFKPLTIVIAIAMGVMFLGDTLHIGSIIGATIISIGLYTVLWGKSKEAEEDVVGSLESVTSDENVPLLHSYNTPYYCGNKRDTNV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151522g00005 253 PANTHER WAT1-RELATED PROTEIN 144 221 IPR030184 GO:0016020|GO:0022857
Stsc151522g00005 253 Pfam EamA-like transporter family 30 134 IPR000620 GO:0016020
Stsc151522g00005 253 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 214 - -
Stsc151522g00005 253 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151522g00005 Stsc-Chr151522 21521 29975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151522g00005 142 241 Nodulin-like Gene Family AT3G28050 46.847 1.27e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151522g00005 - - gmx:100790743 181.415