Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151522g00001 ATGCAACAATCTATTGAACCATTTCATGGGATCATGTCAACAAGAACAAGAAGATGGTGGTTTTACAGTGACACGTTGCCATTGATTGTGATAATAGGCACACAGTGCAGTGACACCGCCTTGTCAACTCTCTTCAAAGCAGCTACTGAGAGAGGCATGAGCCACCTTGTCTTTGTTGCATACGCTTATGCTGTTGCTACCACTCTCCTCCTTCCTTACCTCTTTTTCTTCAAAAGATCATCATCAGTGGCTCCTCCAATCAGTTTTTCCATACTCATCAAGATCGTCCTTCTTGGGGTATTAGGAAGCTCATCTCAGGTATTGGGGTATGCTGGCATCAATTACAGCTCTCCATCCCTTGCTTCATCAATCAGCAACCTTCTCCCTGCTTTCACCTTCTTGCTTGCCATTGCATTCAGGATGGAAAAGGTAGCTGCAAAGAGTAGAAGTAGCCAAGCAAAGGTAATAGGAAGCATTGTATCAATAGGAGCGGCATTTGTAGTAACATTCTACAAAGGTCCTTCTATCAACATTGCTCAAAGTCACCTTTCTTTACCAACTGAACAACAAGTTATTAGCATTCCAAATTCAGTAGATACAACTTGGGTCATTGCTGGAACACTTCTCACAGCTGATTACTTACTGGTTTCACTATGTTACATTTGGCAGGCCGAAATCTTGAAGGAATACCCTGATGAGTTAACTGTGGTCTTCTTTTACAATGTCACTGCAACTATTGTGTCAGTAACTGTAGCTTTATTCACAGAGAGAAGTACAAGTGCTTGGGAAATAGGACTTGACATATCATTGGTTTCTATTATTTCCTCTGGAATATTTGGAAAGCTCATGAGCAATGCTGTTAATGCCTGGGCACTGCACTTAAAAGGAGCTGTCTATGTAGCAACATTCCAGCCACTCTCAATTGTTATTGCCACTGCCATGGGAGTTGTGTTCTTTGGTGATACTCTGCACATTGGAAGTGTAATTGGAGCTGCAACCATATCAATTGGCTTTTATACTGTATTGTGGGGCAAAGCAACAGAAAAGACAGAAGAAGAAGAAGATTTTGGTAACCTGGAATCACAAACTATTGAGAATGTTCCTCTTTTGCATAGCTATAAAACTGTAAATGGAAATGTACATAATACAAGTACAAACTAG 1161 0.4083 MQQSIEPFHGIMSTRTRRWWFYSDTLPLIVIIGTQCSDTALSTLFKAATERGMSHLVFVAYAYAVATTLLLPYLFFFKRSSSVAPPISFSILIKIVLLGVLGSSSQVLGYAGINYSSPSLASSISNLLPAFTFLLAIAFRMEKVAAKSRSSQAKVIGSIVSIGAAFVVTFYKGPSINIAQSHLSLPTEQQVISIPNSVDTTWVIAGTLLTADYLLVSLCYIWQAEILKEYPDELTVVFFYNVTATIVSVTVALFTERSTSAWEIGLDISLVSIISSGIFGKLMSNAVNAWALHLKGAVYVATFQPLSIVIATAMGVVFFGDTLHIGSVIGAATISIGFYTVLWGKATEKTEEEEDFGNLESQTIENVPLLHSYKTVNGNVHNTSTN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151522g00001 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 63 171 - -
Stsc151522g00001 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 345 - -
Stsc151522g00001 386 Pfam EamA-like transporter family 40 168 IPR000620 GO:0016020
Stsc151522g00001 386 PANTHER WAT1-RELATED PROTEIN 26 352 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151522g00001 Stsc-Chr151522 1153 13629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151522g00001 18 375 Nodulin-like Gene Family AT3G28050 48.780 5.61e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151522g00001 - - gmx:100790743 421.779