Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151513g00004 ATGGCAAGTGTCAAAGTCATCTCAACAAGCACAATCCATGCAGCAAACAAGGATTCTCCAATGGTGGATCAGGAGATTCCATTAACTCCATGGGATCTCCAATTTCTCTTATTTGATCCCATTCAAAATGGCCTCCTATTCCGTTATAACAAACTCATAACTACTCCAATGACAAGCATAATCCAACACCTCAAACATTCCCTTTCATCCACCCTCTCTTTCTTCCCACCCTTAACGGGCCGCCTTTCCATTACGGAACACGAGGACAACACTTCCTCCGTTTCTGTTACTTGCAACAACTCCGGAGCGCTCTTTGTTCACGCCGTTGCGGACAACTACTCCGTTAACCACATCGTTAATTCCGTTTACACTCCGAGCTTTGTGCACTCTTTCTTCCCGCTTAACGGCGTCAGAGACTACGAAGGAACAACAATGCCGTTGTTGGCGGTTCAAGTAACCGAACTCAACGATGGTTACTTCCTTGGCTGCACCATGAACCATGCTGTTGTAGACGGAACTTCCTTTTGGCATTTCATGAATTCTTGGGCTGAGATCTCACGTGGCTCCGAAGAATTGTCGAAGCCTCCGGTTCTTGAACGTTGGTTCCTTGATGACGGCGTTCATGGCTATTCTTCTATACCAGTTCCTTTGACGAAGGAGAAGATGATACAACGCGGTAATTACGATGATTTCCCAAGCAAGTTTCTAAAAAAAATTCTTGAAGTATTCTTTTCGGGGTTTAGGTTAGGCATACAATAA 759 0.4493 MASVKVISTSTIHAANKDSPMVDQEIPLTPWDLQFLLFDPIQNGLLFRYNKLITTPMTSIIQHLKHSLSSTLSFFPPLTGRLSITEHEDNTSSVSVTCNNSGALFVHAVADNYSVNHIVNSVYTPSFVHSFFPLNGVRDYEGTTMPLLAVQVTELNDGYFLGCTMNHAVVDGTSFWHFMNSWAEISRGSEELSKPPVLERWFLDDGVHGYSSIPVPLTKEKMIQRGNYDDFPSKFLKKILEVFFSGFRLGIQ 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151513g00004 252 Gene3D - 3 213 IPR023213 -
Stsc151513g00004 252 SUPERFAMILY CoA-dependent acyltransferases 23 188 - -
Stsc151513g00004 252 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 232 - -
Stsc151513g00004 252 Pfam Transferase family 3 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151513g00004 Stsc-Chr151513 12684 13442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151513g00004 62 203 Monolignol Biosynthesis Gene Families AT5G48930 31.818 5.86e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151513g00004 - - pvy:116114536 239.965