Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151509g00001 ATGATGGCATCATCAGATGATTATTCTACTAGCGTTCCAAGTCACACAAAAGCATGGTTCTATTCAGAACATGGGATGCCAGAAAATGTTCTAAAGGTACATCCAAATTGGCCAATACCAGAACTGAAAGAGGACCAAGTGCTCATCAAAGTTGTGGCTGCATCCCTTAATCCAGTTGATAATAAAAGAATGACTGACTTCTACAAAGACATATACAACCCTGATCCACATCTCCCTATTGTTCCAGGGTTTGATGTTGCCGGTATAGTGGTGAAATTGGGAGGTGAAGTGACGAAATTTAAAGTTGGGGATGAAGTTTACGGTGACATTAACGAGGAAGGGATAGAAAACCTGAAGAGTCTTGGGACTTTGTCGGAGTACACTATTGCTGAAGAGAGGCTTTTGGCTCACAAGCCCCCTAATCTCACCTTCGTTGAAGCTGCTAGCTTTCCTGCCGCAGTTGAGACTGCTTATGAAGGTCTTGACAGAGCTCACTTTTCTGCTGGAAAATCTATTCTTGTTCTCGGAGGTGCTGGCGGAGTTGGAACTCAAGTTATTCAGCTTGCGAAGCATGTTTATGGCGCATCAAGGATAGCAGCAACATGTAGCACTGGAAAACTCGAATTCTTAAGAAAATTGGGAGTTGACTTCCCTATTGATTACACAAAGCAAAACTTTGAAGAGCTGTCAGAAAAGTTTGATCTAGTGTACGACACCGTAGGAGAAACTGAAAGAGCGTTGAAAGCTGTGAAAGAAGGTGGGAAAGCAGTGACAATAGTACCTCCTGGAGTTCCACCAGCTATCTTTTTCGTTCTAACTTCCAAGGGATCCATCTTAGACGAATTAAGGCCTTTCTTTGAGAGCGGCAAGGTCAAGCCAATTCTCGACCCCCTCACTCCAGTCCCATTTTCTCAAGTCATTCAAGCTTTTTCTTATGTCCAAACTGCTAAAGCCACTGGAAAGGTCGTCGTTTATCCCATCCCATGA 987 0.4357 MMASSDDYSTSVPSHTKAWFYSEHGMPENVLKVHPNWPIPELKEDQVLIKVVAASLNPVDNKRMTDFYKDIYNPDPHLPIVPGFDVAGIVVKLGGEVTKFKVGDEVYGDINEEGIENLKSLGTLSEYTIAEERLLAHKPPNLTFVEAASFPAAVETAYEGLDRAHFSAGKSILVLGGAGGVGTQVIQLAKHVYGASRIAATCSTGKLEFLRKLGVDFPIDYTKQNFEELSEKFDLVYDTVGETERALKAVKEGGKAVTIVPPGVPPAIFFVLTSKGSILDELRPFFESGKVKPILDPLTPVPFSQVIQAFSYVQTAKATGKVVVYPIP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151509g00001 328 SUPERFAMILY GroES-like 16 178 IPR011032 -
Stsc151509g00001 328 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 169 190 IPR002364 GO:0008270|GO:0016491
Stsc151509g00001 328 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 9 328 IPR044626 GO:0016628
Stsc151509g00001 328 Pfam Zinc-binding dehydrogenase 213 324 - -
Stsc151509g00001 328 SMART PKS_ER_names_mod 25 324 IPR020843 GO:0016491
Stsc151509g00001 328 CDD MDR_like_2 17 324 - -
Stsc151509g00001 328 Gene3D - 161 275 - -
Stsc151509g00001 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 142 268 IPR036291 -
Stsc151509g00001 328 Gene3D - 24 324 - -
Stsc151509g00001 328 Pfam Alcohol dehydrogenase GroES-like domain 45 109 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151509g00001 Stsc-Chr151509 2190 5717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151509g00001 79 283 Monolignol Biosynthesis Gene Families AT4G37990 26.423 3.00e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151509g00001 K18980 - gmx:100788619 489.96