Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151507g00001 ATGACATCAAATATCATCTTCATCTTGGCACGTGACGACAAAGTGTTTCGTAGACGAATGGTTATTGGAGTAGCATATGTTGGGGTTGATGAGAAAATCTTAAGTGGTGTTGAAGTAGACAAATGGGTTGATATAGTTGATGGAAGCAAAAACCCAATAGCTGGGGGTGCAAAGATCCATGTCAAGCTACAATTTTTTGATGCTAAACGACACCAAAACTGGTCTCAAGGAATCAAAGCTCCTGACTTTCCTGGAGTTCCTCGCACTTTCTTCTCACAGCAAAAGGGATGCAAGGTTACTCTATACCAGGATGCTCATGTCCTGGATGATTTTTCCCCAAGAGTAGTGCTCGATGGAGGTGAGACTTACAAGCCTCAAAGATGCTGGGAAGATATATTTGATGCAATCAATGAAGCAAAACACTTTATATACATTGCTGGCTGGTCTCTTTACACTGAGATTTCTCTTATAAGAGATCCAAAGAGGCCAAAGCATGGGGGAGACATAACACTTGGCCAGCTTCTCAAGAAAAAAGCAAACGACGATGGAGTCAAGGTTGTGCTGCTTCTATGGCAGGATGGAATTCGAGTTCCTATAATTGGTTATCCCATCAGAATCATGTATACTCATGATAAAGAAACCCTAAGCTATTTTAAGGACACTAATGTGCACTGCGTTTTATGCCCTCGTGACAGTGATTTTTTCTCTCATCATCAAAAGATTGTGTTGGTGGATTCTAAGTTGCCGAATAATGGAGATGAGTCAAAAAAAAGAAGAATAGTGAGTTTCATTGGAGGTATTGATCTTTGTGACGGAAGATATGATACTCAATCTCATTCTCTTTTTCAAACTTTAGCCATTGAACACAGTAAGGATTTTTATCAACCAAGCATTGATGGCTCTTCGATTGAAAAGGGTGGTCCTAGGGAACCATGGCATGACGTGCATTGCAAGCTTGAAGGGCCGATCGCATGGGATGTTTATTCCACCTTTGTTCAGAGATTTAAGAAACAGGGCACAGATCAGAGCAAGCTTCTTTCAGAGGAAGAGCTTAAAGATTTCATCATTGCACCACCTCAAGTAATGGACCCTGACAAAAAGGACGCGTGGAATGTTCAGTTATTCAGATCTATTGATGATACAGCTACTCTTGGGTTTCCAGAAAGTGCTAAAGAAGCTTTTAATGTTGGTCTTGTTAGGGAGGAGAACAAGATGATAGATCGGAGCATTCAAGATGCATACATAAGTGCTATTCGTCGTGCTAAGAATTTCATCTACATTGAGAATCAGTATTTCATAGGAAGCACTTTCGGTTGGAGTGTGGATAACACCAAATTTGATGCTTGGAATCTGATCCCAAAGGAGCTTTCACTCAAAATTGTTAGCAAGATTAAAGCCAGGGAGAAATTCATGGTGTATGTAGTGATTCCAATGTGGCCAGAGGGTCTCCCGAAAGATAACAAGATAACTGGAACTGGAACTACTCAGAGGATACTATATTTGCAAAGGAGGACCATAGAGATGATGTATAAGGACATTGTTCAAGCACTCAAGAAAGAGAAAATTGAAGAAGATCCTCGTAAATATTTATCATTCTTTTGTCTTGGCAATCGAGAGGAGAAGAAGGACGGGGAATATGTGCCTCCACAAAGACCAAAAGAAGGTTCCCATTACCGGAAAGCCCAAGACGCCAGACGCTTCATGATTTATGTGCATTCCAAGATGATGATAGTTGATGATGAATACATAATCATGGGATCTGCCAACATCAACCAGAGATCAATGGATGGCGGTAGAGACACCGAGATTGCCATGGGAGCTTATCAACCGCACCATTTGGCCACCAACAAGGGTGGTGCGAGGGGCCAAATCCATGGCTTTCGCATGTCCCTATGGTACGAGCACCTCGGCATGCATGAAGACACCTTCCTCAACCCTGAAAGTAAAGAATGTATTAACAAAGTGAAGCAGCTTGCTGAGAAGTATTGGAATTTGTATTCTAATAAAGATTCAGTTAACCTTCCTGGCCACTTGCTTCAGTATCCTATTGAAATTTCTGCTGATGGAACTGTCACAAATATTGAAGGATTTGAGTTCTTCCCAGACACTGATGATGCTCCTATTCTAGGTGAAAAAATTCTACTTTACTAG 2151 0.4124 MTSNIIFILARDDKVFRRRMVIGVAYVGVDEKILSGVEVDKWVDIVDGSKNPIAGGAKIHVKLQFFDAKRHQNWSQGIKAPDFPGVPRTFFSQQKGCKVTLYQDAHVLDDFSPRVVLDGGETYKPQRCWEDIFDAINEAKHFIYIAGWSLYTEISLIRDPKRPKHGGDITLGQLLKKKANDDGVKVVLLLWQDGIRVPIIGYPIRIMYTHDKETLSYFKDTNVHCVLCPRDSDFFSHHQKIVLVDSKLPNNGDESKKRRIVSFIGGIDLCDGRYDTQSHSLFQTLAIEHSKDFYQPSIDGSSIEKGGPREPWHDVHCKLEGPIAWDVYSTFVQRFKKQGTDQSKLLSEEELKDFIIAPPQVMDPDKKDAWNVQLFRSIDDTATLGFPESAKEAFNVGLVREENKMIDRSIQDAYISAIRRAKNFIYIENQYFIGSTFGWSVDNTKFDAWNLIPKELSLKIVSKIKAREKFMVYVVIPMWPEGLPKDNKITGTGTTQRILYLQRRTIEMMYKDIVQALKKEKIEEDPRKYLSFFCLGNREEKKDGEYVPPQRPKEGSHYRKAQDARRFMIYVHSKMMIVDDEYIIMGSANINQRSMDGGRDTEIAMGAYQPHHLATNKGGARGQIHGFRMSLWYEHLGMHEDTFLNPESKECINKVKQLAEKYWNLYSNKDSVNLPGHLLQYPIEISADGTVTNIEGFEFFPDTDDAPILGEKILLY 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151507g00001 716 Gene3D Endonuclease Chain A 358 615 - -
Stsc151507g00001 716 Pfam Phospholipase D C terminal 640 711 IPR024632 -
Stsc151507g00001 716 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 567 594 IPR001736 GO:0003824
Stsc151507g00001 716 Gene3D Endonuclease Chain A 118 357 - -
Stsc151507g00001 716 SMART pld_4 233 273 IPR001736 GO:0003824
Stsc151507g00001 716 SMART pld_4 567 594 IPR001736 GO:0003824
Stsc151507g00001 716 SUPERFAMILY Phospholipase D/nuclease 408 652 - -
Stsc151507g00001 716 PANTHER PHOSPHOLIPASE D 10 711 IPR015679 -
Stsc151507g00001 716 SUPERFAMILY Phospholipase D/nuclease 69 337 - -
Stsc151507g00001 716 Pfam PLD-like domain 417 602 IPR025202 -
Stsc151507g00001 716 PIRSF PLD_plant 1 716 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Stsc151507g00001 716 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 233 273 IPR001736 GO:0003824
Stsc151507g00001 716 Pfam Phospholipase D Active site motif 234 273 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151507g00001 Stsc-Chr151507 4949 9515 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151507g00001 1 712 Phospholipase D Gene Family (Wang group) AT3G15730 59.396 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151507g00001 K01115 - jre:109013902 898.271