Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151495g00002 ATGAAGTTCCACTATTGTTATTTTTCCTTCTTCCTTATTTTAATCATCTTGGAGCTTATCACCACTTCAAGTTTGGCTTATGCATTTTTGTCAACTGATTACTATCATAGAAAGTGCCCTGTTGCTGAAGGCATTATCTCACAAAAGGTTTCTGCATGGATTAAGAAGGATCCCACATTGGCCCCTGCCATAATCCGCTTGCACTTCCATGACTGTGCCATTAGAGGATGCGATGGATCAATTTTGCTTAACCATACAGGTAGTGAGAGAACTGCATTTGAGAGCGCAACTCTGAGAGGTTTTCAATTGATTGATGACATCAAATTCGAGCTGGAAAGAAGGTGTCCAAAAACAGTCTCTTGCGCCGACATTCTAACTGCCGCTGCAAGAGATGCCACAATTCTAGCAGGGGGGCCATTCTGGGAAGTTCCATTTGGCCGCAAGGACGGTCAAACTTCCTTAGCCAGAGAAGCCAGTATGGTCCCCCATGGCCATGAAAATGTCACAGCCCTTCTTGAATTCTTTCAAGCAAGAGGCCTAGACATGCTTGATTTGGTTGCTCTTTCAGGTTCACACACAATTGGGAGGAGTACTTGCCACTCATTCATGGATAGGCTTTACAACTTTAATGGTAGCGGGGAGCCTGACCCATCACTAAATGTGTATTACTTGAAGCTGTTAAGGAAAAGGTGCAAAAGTGAGTTGGATTTGGTGTACCTTGATGCCATAACACCAAGGACTTTTGACACAACATATTACACAAACCTAATGAGGAAGGTTGGGTTATTGGCAACAGATCAATCACTGTTTTCAGATGTAAGGACCGCTCCTTTTGTTGAAGCATTTGCAACACAACCTTTTCTTTTCAACAGCCAGTTTGCAGTATCAATGGTGAAGCTTGGGAATGTTGGGATTCTCACTGGCTCAAGTCAAGGTGAAATCAGAGTGAACTGCAACTATGTCAATGCTGCGTAA 975 0.4328 MKFHYCYFSFFLILIILELITTSSLAYAFLSTDYYHRKCPVAEGIISQKVSAWIKKDPTLAPAIIRLHFHDCAIRGCDGSILLNHTGSERTAFESATLRGFQLIDDIKFELERRCPKTVSCADILTAAARDATILAGGPFWEVPFGRKDGQTSLAREASMVPHGHENVTALLEFFQARGLDMLDLVALSGSHTIGRSTCHSFMDRLYNFNGSGEPDPSLNVYYLKLLRKRCKSELDLVYLDAITPRTFDTTYYTNLMRKVGLLATDQSLFSDVRTAPFVEAFATQPFLFNSQFAVSMVKLGNVGILTGSSQGEIRVNCNYVNAA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151495g00002 324 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 SUPERFAMILY Heme-dependent peroxidases 30 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 ProSiteProfiles Plant heme peroxidase family profile. 29 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 Pfam Peroxidase 47 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 PANTHER - 12 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 CDD secretory_peroxidase 30 321 IPR033905 GO:0004601|GO:0042744
Stsc151495g00002 324 FunFam Peroxidase 33 172 - -
Stsc151495g00002 324 Gene3D Peroxidase, domain 2 162 300 - -
Stsc151495g00002 324 Gene3D - 33 322 - -
Stsc151495g00002 324 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Stsc151495g00002 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Stsc151495g00002 324 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151495g00002 324 FunFam Peroxidase 162 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151495g00002 Stsc-Chr151495 8606 11259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151495g00002 29 323 Peroxidase AT1G30870 52.189 9.68e-112 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151495g00002 K00430 - gmx:100792775 501.901