Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151493g00003 ATGGCAGATGAAACACAAAATGATTTGAAGGAGGAGGTTCCGGAAATTGCACCATTTGATCCTACTAAGAAGAAGAAGAAGAAGAAAATCACCATTTTGGATCCTGCTGATGATGATTCAGTAGACAAGTTGACTGAGAAGACAGAAAACCTGTCAGTTTCTGAGGGAGTTGAGACTGCCTTTTCTGGTTTGAAGAAGAAGAAAAAGAAGCCAGTTGAAATCAGTAACTTGATTGATGAGAGTGGAGATGCAAATGAAGATTTAGATGATCAAGCTGAAGATGATGAAGGAGAAGGGATTTCTTTGCATCCTCGTTATCCTTGGGATGGGACTGATCGTGATTATAAGTATGAGGAGCTTCTTGGCAGGGTGTTTAACATTCTAAGAGAGAATAATCCAGAACTTGCTGGAGATCGACGGAGGACAGTTATGAGGCCACCTCAAGTCCTTCGTGAGGGTACAAAGAAAACTGTGTTCGTGAATTTTATGGATCTATGCAAAACGATGCATCGGCAGCCAGACCATGTCATGGCCTTCTTGCTTGCTGAATTGGGTACAAGTGGATCCCTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGGTTTGCACCAAAGAACTTCGAAGGAATTCTGCGACGCTATATCAATGAATATGTCATTTGCCTTGGATGCAAGAGTCCAGACACTATACTTTCAAAGGAAAACCGTCTGTTCTTTCTCCGTTGTGAGAAGTGTGGATCTGGAAGATCAGTTGCTCCTATCAAGGCTGGTTTTGTTGCTCGTGTTGGTCGTAGGAGCACAGGAACATGA 810 0.4296 MADETQNDLKEEVPEIAPFDPTKKKKKKKITILDPADDDSVDKLTEKTENLSVSEGVETAFSGLKKKKKKPVEISNLIDESGDANEDLDDQAEDDEGEGISLHPRYPWDGTDRDYKYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRSTGT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151493g00003 269 Pfam Domain found in IF2B/IF5 138 247 IPR002735 GO:0003743|GO:0006413
Stsc151493g00003 269 Gene3D - 112 254 - -
Stsc151493g00003 269 FunFam Eukaryotic translation initiation factor 2 subunit 112 254 - -
Stsc151493g00003 269 MobiDBLite consensus disorder prediction 1 22 - -
Stsc151493g00003 269 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 118 267 IPR045196 GO:0003743|GO:0006413
Stsc151493g00003 269 MobiDBLite consensus disorder prediction 80 96 - -
Stsc151493g00003 269 SMART eIF2Bneu4 139 248 IPR002735 GO:0003743|GO:0006413
Stsc151493g00003 269 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 218 253 IPR016190 GO:0003743|GO:0006413
Stsc151493g00003 269 MobiDBLite consensus disorder prediction 1 40 - -
Stsc151493g00003 269 MobiDBLite consensus disorder prediction 76 106 - -
Stsc151493g00003 269 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 114 221 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151493g00003 Stsc-Chr151493 18945 22274 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151493g00003 1 267 Eukaryotic Initiation Factors Gene Family AT5G20920 76.952 2.68e-141 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151493g00003 K03238 - gmx:100783618 488.419