Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151492g00004 ATGAATAAGAACAAGAAGAAGTATTCATGCCCTGAAGAAGGGTGCAGATGGAACAAGAATCACGCGAGGTTTCAGGCACTGAAATCAATGGTGTACATGTGTTTGAAGATGAAGAACCACTACAAGAGAAGCCATTGTCCCAAGATGTATGTTTGCAAGAGGTGCAACAACAAGAACTTCTCTCTGCTCTCTGATTTGAGGACTCATGAGAAGCACTGTGGTGATCCCAATAAATGGCTGTGTTCTTGTGGAACCACTTTCTCTAGAAAAGACAAGCTTATTGGACATCTTGCTTTGTTTCATGGCCACTCTCCAGCTAATGCTACCTCCATTGCTGCTACTCAAAGAACATAG 354 0.4266 MNKNKKKYSCPEEGCRWNKNHARFQALKSMVYMCLKMKNHYKRSHCPKMYVCKRCNNKNFSLLSDLRTHEKHCGDPNKWLCSCGTTFSRKDKLIGHLALFHGHSPANATSIAATQRT 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151492g00004 117 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 3 108 IPR044300 GO:0010044|GO:0010447
Stsc151492g00004 117 Gene3D Classic Zinc Finger 48 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151492g00004 Stsc-Chr151492 36221 36574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151492g00004 5 114 C2H2 Transcription Factor Family AT5G22890 65.455 1.47e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Stsc151492g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151492g00004 - - adu:107476493 207.994