Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151491g00004 ATGGAAGACACCATGAGAGGGATTAGAAGGATAATTATCCTTAACTGGTGTTCTAACCACATGCTGGTTTTCTTCCTTTTGTGTTCATTCTTTTGCACTTGCATACATTCTTATGCAAGAGATACCATAACCATTAACACTTTCTTACTAGATGGAGGAGGAGATACTCTAATTTCTGAAGGAGAAAACTTTGAGCTGGGATTTTTCACCCCTAATGGAAGCTCTAGTGTCAGAAGAAGATATATTGGAATATGGTACTACAATTTGAGTCCAAGAACAGTTGTGTGGGTGGCTAATAGGGACAACCCTCTTGAAGATTCTGGCAGCGCTTTCGGCATCTCAGAGGATGGTAATCTAAAGGTTCTGGGCAGAAATGGTAGACCCTATTGGGGGACAAGTCTTGAAACAACATCAAATTCATCATCACTTCACAGAACACTGAAGCTAATGGACAATGGTAACCTCATTGTAATTGATGAACAAGACCAAGAAGAAAACAAGAAAGAAACAAAGATCCTTTGGGAGAGTTTTGCTAATCCAACAGACACATTCCTTCCGGGGATGAAAATGCATCAGGGTTTAGCATTAACTTCGTGGCGAAGCAATGTCGACCCTGCGCCGGGGAACTACTCTTTCGAGCGAGATCAAGAAGATAGCAGCAATGATAACAACAACAACAATGACCAATACATCATATGGAAGAGATCCATAAGATATTGGAAAAGCAGTGTGACAGGTAAGGTAGTTGGAACAGGTGAAATGTCATTAGCAATATCTTATTTCCTTTCAAATTTCACTGAGAAAATCTCCTCAAACTACAACAACACAGTCCCTTTTCTCACTTCTTCACTGTATAGCAACACAAGGTTGGTTATGACTTACTGGGGTCAGCTTCTTTATCTGAAGATGGATTCAGAGAAAACTTGGTCTAATGTTTGGGTTGAGCCTAGAGATAGATGCAGTGTGTTCAATGCCTGCGGAAATTTCGGAAGCTGTAATAGCAAGTATGATACTATGTGCAAGTGCTTGCCGGGGTTCAGGCCTAACTCTGTTGAGAGTTGGGATTCCAGTGATTTTTCCGGTGGATGCAGCCGGAAAACTAACGTGTGCGGCGAGGATGCTAAGAGTGACACGTTCTTGAGGCTGAAAATGATGAAAGTTGGGAATCCAGATGCGCAGTTTAAGGCCAAGAATGAAGAGGAATGCAAGGCAGAGTGCCTTAACAACTGCCAGTGCTATGCCTATTCTTATGAAGACGATGAGACCGGAAGCAGCGAGGGCGGTGGTGGCGACCGCAGTGGTGATGCTGTTTGCTGGATTTGGTCTGAGGACCTAAACAATCTAGAAGAAGATTACGAGAATGGCTGCGACCTCAATGTCCGTGTAGCGTTTTCGGACATAGAATCCACAAGGAAGAGTTGTGGAACTTGTGGCACAAACATCATTCCATATCCCCTAAGCAGAGGAGCAAATTGTGGTGACCCAATGTACTTAAGTTTCCATTGCAATGATTCCACCGGCCAGCTCGATTTTGAGACTGCAGGGGGTGCTTTTCCGGTGATAAGCATAGATCAGGATAAGCGAAAATTTGTTATTCACATTGAAGATATACATAACTGTGAGGGACAAACATCAAGGGACAACAACAAGCTTCTGCTTCTCAATGATTCATCTCCATTCCATCTTACTGGTACATGCTATGCTGATCCAAGAACCTTTACTTCTGCTGCTTCAATGAAACGTGGAATAGAGTTGGAACTGAATTGGGATCCCCCGCCGGAGCCGATTTGCTCCACGATGCTGGATTGCATGGATTGGCCAAATTCAAGTTGCAATACCACAAGTGATGGCAAGAAGAGGTGCCTTTGCAACACTAACTATTTTTGGGATGGCATGAAATTGAACTGTACTAATGGCAATCAGAGCTACCAAACAGACAAGAATCTGTCCTTAACTCAGATCATAGAAATCACTTTTACAATTGTGATTGCCATCATTCTTCTCTCAAGTACTTTGATATATATCTACTTGAAGAAAAGGAGACAAGCCAATACACAAGAAATGAGGGCATATTCTCAGAAGAACCCTGGCCTTAGCAGGTATGACAGTGAGAAATATGTAAGAGACTTGATTGAATCTGGTAGGTTCAAAGAAGAGAATTCACAGGCCATAGATATTCCACATTTTCATTTAGAAAGTGTTCTTGATGCTACTAATAACTTTGCAATTGCAAACAAGCTTGGACAAGGAGGGTTTGGTCCTGTTTATAAGGGAAAATTTCCCGGCGGACAAGAAATAGCCGTAAAGAGACTCTCGAGTTGTTCCGGACAAGGTTTAGAAGAATTCAAAAATGAAGTTGTGTTGATCGCCAAACTTCAACATCGGAACCTAGTTAGGCTTCTTGGTTATTGTCTTGAGGGAGATGAAAAGATGTTAATATATGAATACATGCCAAACAGAAGCCTAGATGGTTTCATATTTGACCGGAAGCTATGTGTTCTATTAGACTGGGATATGCGCTTCAAGATTATTTTGGGGATAGCTCGAGGCCTTCTTTACCTTCACGAAGATTCAAGGTTAAGGATCATTCACAGAGACTTGAAAACAAGCAATATTCTATTGGATGAAGAGAAGAACCCTAAAATTTCAGATTTTGGCTTGGCTAGAATATTTGGAGGGAAAGAGACAGTAGCAAACACAGACAGAGTGGTTGGAACTTATGGATATATGTCTCCAGAATATGCACTTGACGGACATTTTTCGGTCAAGTCCGATGTCTTTAGCTTCGGAGTGGTAGTTCTTGAGATCATCAGTGGAAAAAGAAACACTGGATTTTATCAAGCAGAACATGAATTGAGTCTTCTAGGATATGCATGGCATTTATGGAAAGTGGGAAGGGCATTGGACTTCATGGACCAGACACTATGTGAAACATGCAATGCTGATGAGTGCTTGAAGTGTGTGAATGTAGGGCTGCTATGCCTACAAGAAGATCCAAATGAAAGACCAAACATGTCAAATGTGGTCTTCATGCTTGGCAGTGAATCCAACACTCTTCCAAGTCCTAAGGAACCAGCCTTTGTAAAGAGGAGTTGCCCTTCTAGCAGGGCCTCTACTTCTAGTAAATTGGAAACTTTTTCAAGAAATGATTTGACTGTTACCTTAGAAAATGGCAGTACTCTATTTCAAGCCAGTAGTTCTATCGACAACTCTCCAGTAGCTCTGCCGTCTATTCTAGTCATGCCATAA 3249 0.418 MEDTMRGIRRIIILNWCSNHMLVFFLLCSFFCTCIHSYARDTITINTFLLDGGGDTLISEGENFELGFFTPNGSSSVRRRYIGIWYYNLSPRTVVWVANRDNPLEDSGSAFGISEDGNLKVLGRNGRPYWGTSLETTSNSSSLHRTLKLMDNGNLIVIDEQDQEENKKETKILWESFANPTDTFLPGMKMHQGLALTSWRSNVDPAPGNYSFERDQEDSSNDNNNNNDQYIIWKRSIRYWKSSVTGKVVGTGEMSLAISYFLSNFTEKISSNYNNTVPFLTSSLYSNTRLVMTYWGQLLYLKMDSEKTWSNVWVEPRDRCSVFNACGNFGSCNSKYDTMCKCLPGFRPNSVESWDSSDFSGGCSRKTNVCGEDAKSDTFLRLKMMKVGNPDAQFKAKNEEECKAECLNNCQCYAYSYEDDETGSSEGGGGDRSGDAVCWIWSEDLNNLEEDYENGCDLNVRVAFSDIESTRKSCGTCGTNIIPYPLSRGANCGDPMYLSFHCNDSTGQLDFETAGGAFPVISIDQDKRKFVIHIEDIHNCEGQTSRDNNKLLLLNDSSPFHLTGTCYADPRTFTSAASMKRGIELELNWDPPPEPICSTMLDCMDWPNSSCNTTSDGKKRCLCNTNYFWDGMKLNCTNGNQSYQTDKNLSLTQIIEITFTIVIAIILLSSTLIYIYLKKRRQANTQEMRAYSQKNPGLSRYDSEKYVRDLIESGRFKEENSQAIDIPHFHLESVLDATNNFAIANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCLEGDEKMLIYEYMPNRSLDGFIFDRKLCVLLDWDMRFKIILGIARGLLYLHEDSRLRIIHRDLKTSNILLDEEKNPKISDFGLARIFGGKETVANTDRVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQAEHELSLLGYAWHLWKVGRALDFMDQTLCETCNADECLKCVNVGLLCLQEDPNERPNMSNVVFMLGSESNTLPSPKEPAFVKRSCPSSRASTSSKLETFSRNDLTVTLENGSTLFQASSSIDNSPVALPSILVMP 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151491g00004 1082 ProSiteProfiles Bulb-type lectin domain profile. 42 170 IPR001480 -
Stsc151491g00004 1082 ProSiteProfiles Protein kinase domain profile. 741 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151491g00004 1082 Pfam S-locus glycoprotein domain 250 349 IPR000858 GO:0048544
Stsc151491g00004 1082 CDD B_lectin 52 180 IPR001480 -
Stsc151491g00004 1082 Pfam PAN-like domain 373 447 IPR003609 -
Stsc151491g00004 1082 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
Stsc151491g00004 1082 Pfam D-mannose binding lectin 93 191 IPR001480 -
Stsc151491g00004 1082 Gene3D Phosphorylase Kinase; domain 1 704 816 - -
Stsc151491g00004 1082 Gene3D Transferase(Phosphotransferase) domain 1 817 1023 - -
Stsc151491g00004 1082 SUPERFAMILY Protein kinase-like (PK-like) 722 1012 IPR011009 -
Stsc151491g00004 1082 CDD PAN_AP_plant 370 463 - -
Stsc151491g00004 1082 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 817 1020 - -
Stsc151491g00004 1082 Gene3D - 35 178 IPR036426 -
Stsc151491g00004 1082 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 146 1035 - -
Stsc151491g00004 1082 SMART blect_4 48 180 IPR001480 -
Stsc151491g00004 1082 CDD STKc_IRAK 747 1012 - -
Stsc151491g00004 1082 ProSiteProfiles PAN/Apple domain profile. 370 456 IPR003609 -
Stsc151491g00004 1082 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 706 816 - -
Stsc151491g00004 1082 ProSiteProfiles EGF-like domain profile. 316 352 IPR000742 -
Stsc151491g00004 1082 SMART serkin_6 741 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151491g00004 1082 SUPERFAMILY alpha-D-mannose-specific plant lectins 94 205 IPR036426 -
Stsc151491g00004 1082 Pfam Protein tyrosine and serine/threonine kinase 743 1010 IPR001245 GO:0004672|GO:0006468
Stsc151491g00004 1082 SMART ntp_6 374 462 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151491g00004 Stsc-Chr151491 30235 35139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151491g00004 737 1031 Receptor kinase-like Gene Family AT4G23230 60.678 1.42e-121 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151491g00004 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151491g00004 - - gmx:100775297 1610.12