Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151484g00003 ATGACCTACATCCAAATGAAGTACCAACATGAACATCCCTCCTCCACCGTGCACAATTCCACTCGAATTATCGCTGCGGTTGTTGGTGCTCCAAATATTCATGATTTCGCTGTTCTCGGATCAATTTTACATATTAAAGAGATAGAAGATGTTGAGTCTGTTGCCAAAACCATGAGACATCTAGCAGAAAATCCTGAAGAATTTAATCAATCACTGAGGTGGAAGTATGAGGGCCCCGCTGATTCCTTCAAGGCCCTTGTGGATATGACAGCCTTGCATCGATCTTGTCGTTTTTGA 297 0.4276 MTYIQMKYQHEHPSSTVHNSTRIIAAVVGAPNIHDFAVLGSILHIKEIEDVESVAKTMRHLAENPEEFNQSLRWKYEGPADSFKALVDMTALHRSCRF 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151484g00003 98 Gene3D - 5 84 IPR038577 -
Stsc151484g00003 98 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 27 97 IPR001503 GO:0006486|GO:0008417|GO:0016020
Stsc151484g00003 98 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 27 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151484g00003 Stsc-Chr151484 22910 23957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151484g00003 24 98 Xyloglucan Fucosyltransferase1 AT1G49710 64.474 7.16e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151484g00003 K00753 - gmx:100792811 122.094