Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151482g00002 ATGGGTCATTGCCCATGTTTTGGGCTTAGAAAGAAGGCTGATAAAGAAGAGAAGCTCAAGTCTCAACAAGAGCAACACAACAAGGTTTTTGACAAGAAACTCAATTCTCCACACAATAATGTTTCTCCTGAAAAATATTCAGGAATAACAACACCTGAGGCAACTATTACAACAAAGGAGAGTGACAATTATTATTCTAATAACAAGGCTCATATATTTACCTTCCGAGAGCTTGCAACAGCAACAAAAAATTTTAGGGATGAAACATTTATTGGGCAAGGTGGATTTGGAACTGTTTACAAAGGAAAGCTAGGTAAACTAAATCAGGTTGCAGCTGTAAAACGACTTGATACAAGTGGTGTCCAAGGGGAGAAAGAATTCTTAGTGGAGGTTCTGATGTTGTCTCTTTTACGTCATCCAAACCTTGTTAATTTGATTGGTTATTGTGCTGAAGGGGATCAACGCCTTCTTGTATATGATTACATGCCTATGGGATCCTTAGAATCTCGTCTCCATAATCTCCCACGTGATAAAGAAGCTCTTGATTGGAACACAAGAATGAAGATAGCAACGGGGACAGCAAAAGGAATAGACTATCTACACAACAAAGCAAAACCTTCTGTTATATACAGGGATCTAAAATCATCTAACATACTCTTAGACAGGGGTTTTATTCCCAAGCTTTCCGATTTCGGGCTTGCGAAATTCGGTCCAACCGGCGATCAATCGTACGTTGCCACCAGGGTGATGGGAACTCATGGTTATTGTGCTCCTGAATATGCCACAAGTGGGAAGCTAACAAGAAGATCTGACATCTATAATTTTGGAGTTTTATTGTTAGAGCTTATAACTGGACGTAAAGCATATGATGAGGATCGTGGCCATGACAAGCATCTTGTTGATTGGGCACGGCCAATGTTCAAAGATAGAAAGAACTGTTCAAGATTGGCAGATCCACGACTACAAGGTCATCACCCTGGATCTAGACTAACAATGGCAATTGAATTGGCATCCATGTGTCTTAGAGAAGAGCCACGTCAGCGGCCAGATGCCGCCGACATAGTGCTCGCTCTCGATTTCTTGTCTTCCAAGCAATATGTTCCAAGAGAAGCTAACAACATTGATGAGAAAGACAAAGAGAACAACAATGATTCTCCAAAAGGAATAATCACAGTTTTGACCAAAGATGAACAAAGAGAGGAAGCTGTAGCAGAGGCCAAGCTATGGGGTAAGACATGGAGAGAGAGAAAGCAAAATGACCAAAGTAGCCTTGAGGAAATAAATAGATAG 1290 0.4078 MGHCPCFGLRKKADKEEKLKSQQEQHNKVFDKKLNSPHNNVSPEKYSGITTPEATITTKESDNYYSNNKAHIFTFRELATATKNFRDETFIGQGGFGTVYKGKLGKLNQVAAVKRLDTSGVQGEKEFLVEVLMLSLLRHPNLVNLIGYCAEGDQRLLVYDYMPMGSLESRLHNLPRDKEALDWNTRMKIATGTAKGIDYLHNKAKPSVIYRDLKSSNILLDRGFIPKLSDFGLAKFGPTGDQSYVATRVMGTHGYCAPEYATSGKLTRRSDIYNFGVLLLELITGRKAYDEDRGHDKHLVDWARPMFKDRKNCSRLADPRLQGHHPGSRLTMAIELASMCLREEPRQRPDAADIVLALDFLSSKQYVPREANNIDEKDKENNNDSPKGIITVLTKDEQREEAVAEAKLWGKTWRERKQNDQSSLEEINR 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151482g00002 429 Pfam Protein kinase domain 86 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151482g00002 429 CDD STKc_IRAK 91 355 - -
Stsc151482g00002 429 MobiDBLite consensus disorder prediction 369 389 - -
Stsc151482g00002 429 ProSiteProfiles Protein kinase domain profile. 85 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151482g00002 429 MobiDBLite consensus disorder prediction 370 384 - -
Stsc151482g00002 429 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Stsc151482g00002 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Stsc151482g00002 429 Gene3D Phosphorylase Kinase; domain 1 45 161 - -
Stsc151482g00002 429 FunFam Serine/threonine-protein kinase PBS1 162 377 - -
Stsc151482g00002 429 PANTHER OS07G0668900 PROTEIN 22 370 - -
Stsc151482g00002 429 FunFam probable serine/threonine-protein kinase RLCKVII 57 161 - -
Stsc151482g00002 429 Gene3D Transferase(Phosphotransferase) domain 1 162 387 - -
Stsc151482g00002 429 SMART serkin_6 85 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151482g00002 429 SUPERFAMILY Protein kinase-like (PK-like) 63 360 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151482g00002 Stsc-Chr151482 4754 8799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151482g00002 50 423 Glycoside Hydrolase AT3G07070 53.141 9.76e-134 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Stsc151482g00002 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151482g00002 K13430 - gmx:100809298 564.303