Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151469g00002 ATGCAACTGAAAACTAGAGAGTTTTCATTCCTTCTCTTCTTCATACTCATATTCTCTACCATTGCTTCTTTCTCTTATTGTTTACCTTATAATAACGATGAACAATCTGCATTGCTTTCCATAAAAGAAGGTCTCATTGATCCACTCAACAGTCTCAAGGACTGGAAACTGCACGGTGCAGTTCCAGTTCACCACTGTACCTGGACTGGTGTATGGTGCAACTCAAATGGATCCGTCGAAAAGCTTGATCTCTCTCACATGAATCTCACCGGCACCGTTTCCAACGCCATAACAAAACTCAAGAGCCTCACTTCTCTCAAGTTGTGCTGCAATGGATTCACCTCATCGCTCTTCAAATCCGTAGTTAGCGTCACCACGCTGAAGTTTCTTGACGTCAGTTTGATTCCGGAGGAGATTGGAAATCTTTCTTCGCTGGAAACACTTGATCTTAGAGGAAGCTTCTTCGAAGGTTCTATTCCGAAATCGTTTGGTGAATTGCACAGTTTGAAGTATCTCGGACTCTCCGGGAACAATCTCACCGGCGAAATTCCGGCGGAGATCGGAAAATTGTCTTCCCTGGAGTTTATGATTATCGGATACAACGAATTCGACGGTGGAGTTCCGCCGGAATTCGGTAACCTCACGAATCTGAAGTATCTTGATATAGCAGAGGGGAATCTTGGAGGTGAAATTCCAGCAGAGTTGGGGAAACTCAAGCTTTTGGAGACGGTTTTCTTGTACAAGAACAGTTTTGGCGGGAAAATTCCGCCGGAAATCGGAAACATGAGTTCGTTAATGTTCTTGGATCTTTCTGATAACATTTTATCTGGAAAGATTCCAGATGAAATCAGTCAGCTCAAGAATCTTCAGCTACTGAATCTGATGCGAAACCGGTTAACCGGTCCGGTCCCGGCCGGCATCGGAGATTTGAACCAGTTGCAGGTTCTTGAGCTTTGGAACAATTCATTGACAGGAACATTGCCTATAAACCTTGGGAAGAATTCATCATTGCATTGGTTAGATGTGTCATCCAACTCACTCTCCGGTGAGATTCCAGAGAATCTTTGCAGCATGGGAAATCTTACAAAGCTGATACTCTTTAATAACGCTTTCTCTGGTCCAATTCCGTCTAGCTTATCGACGTGTTCTTCCCTTGTTCGCGTTCGGATGCACAACAATTTTCTATCAGGGACGATTCCTGTTGGTTTTGGCGAGCTTAAGAAGCTTCAGAGATTGGAATTGGCTAACAATACTCTCACCGGTGGAATTCCCGACGACATTGCTTCCTCAACGTCGCTTTCTTTCATTGATTTCTCAAGAAACAAGCTCTGTTATTCGCTTCCTTCGATGATTTTCTCCATTATAAATCTTCAGACCTTCATTGTATCCAACAACAACTTGGAAGGCAAAATACCGGACCAGTTGCAGGACTGTCCTTCCCTTGGCGTCCTTGATCTCTCTTCGAATCGATTCTCCGGAAGAATTCCAGCCAGCATTGCCTCGTGTAAGAAATTGGTGAGATTAAGCATGCAGAACAACCGATTGACTGGAGAAATACCGAAAGCTATGGCGAGCATGCCTACATTGTCTATTCTTGATATTGCTAACAACTCTCTGACTGGTAAAATACCTGAAAACTTTGGTATGTCGCCGGCTTTGGAAACATTCAATGTTTCATACAATAAGCTAGAAGGCCCTGTCCCTACAAATGGTGTGCTGAGAGCGATTAATCCGAATGATCTTGCAGGCAATGCCGGCCTCTGTGGTGGTGTCCTCCCTCCATGTGGCCAATCCTCCTCATATTGGTCAAGCCATGGAAATTCTCAGACAAAGCATATTGTTCTAGGATGGATCATTGGAGTATCAACAATCTTCGCTGTTGCAATTGGGATTTTTGCTGCAAGATCATTATACATGAGATGGTACACCAATGGATTGTGCTTCTTCCCAAAAGGATTTTACAAGGGTAACAAACAGTGGCCGTGGCAATTGATGGCATTTCAGAGGGTAGATTTTACAAGTGCTGATATTCTGTCCTGCATCAAGGATACAAATGTGATTGGAATGGGAGCTACCGGCATTGTCTACAAGGCAGAGATAACGCAATCAAGTACTGTTGTTGCAGTCAAGAAATTGTGGAGATCAGGATCTGATATTGAAGCGGGAAGTAGCGATGATCTTGTCGGCGAGGTGAATCTTCTAGGGAGGCTAAGGCATAGGAACATTGTTAGGCTATTAGGATTTCTTTATAATGATGCTGATTTGATGATAATTTATGAGTTTATGTACAATGGAAATCTTGGAGATGCCTTGCATGGCAAGCAAGCTGGAAGATTGCTTGTAGATTGGGTTTCGAGGTATAACATTGCTCTGGGAGTTGCGCAAGGGCTCGCTTATCTTCACCATGATTGTCATCCGGCCGTCATCCATAGAGACATCAAGTCGAATAACATACTGCTTGACACGAATCTTGAGGCAAGGATAGCTGATTTCGGGTTAGCCAAGATGATGATGCATAAGAATGAAACTGTCTCCATGATTGCTGGATCCTATGGATACATTGCCCCAGAATATGGATACTCATTGAAGGTGGATGAAAAGATAGATATCTACAGCTATGGAGTAGTATTACTAGAGCTTCTAACAGGAAAGAGGCCCTTAGATCCAGAATTTGGAGAATCAATAGACATAGTAGGTTGGATTAGAAGGAAAATAGACAATAAATCCCCAAAAGAAGCATTAGACCCTAGTGTAGGAAGCTCCAAGCATGTTCAAGAAGAGATGCTTTTGGTTCTCAAAATAGCACTTCTTTGCACTGCAAAGCTACCGAAAGATCGACCCTCCATGAGAGATGTGATAATGATGCTTGGAGAGGCAAGGCCAAGGAGGAAGAGTGCTATATGCAATGAAACTTCTGAGGCTAACAAGGAAATGCAAAATATTAGCACTTCACCAGTTAGTGGTCTTATCTGA 2973 0.4319 MQLKTREFSFLLFFILIFSTIASFSYCLPYNNDEQSALLSIKEGLIDPLNSLKDWKLHGAVPVHHCTWTGVWCNSNGSVEKLDLSHMNLTGTVSNAITKLKSLTSLKLCCNGFTSSLFKSVVSVTTLKFLDVSLIPEEIGNLSSLETLDLRGSFFEGSIPKSFGELHSLKYLGLSGNNLTGEIPAEIGKLSSLEFMIIGYNEFDGGVPPEFGNLTNLKYLDIAEGNLGGEIPAELGKLKLLETVFLYKNSFGGKIPPEIGNMSSLMFLDLSDNILSGKIPDEISQLKNLQLLNLMRNRLTGPVPAGIGDLNQLQVLELWNNSLTGTLPINLGKNSSLHWLDVSSNSLSGEIPENLCSMGNLTKLILFNNAFSGPIPSSLSTCSSLVRVRMHNNFLSGTIPVGFGELKKLQRLELANNTLTGGIPDDIASSTSLSFIDFSRNKLCYSLPSMIFSIINLQTFIVSNNNLEGKIPDQLQDCPSLGVLDLSSNRFSGRIPASIASCKKLVRLSMQNNRLTGEIPKAMASMPTLSILDIANNSLTGKIPENFGMSPALETFNVSYNKLEGPVPTNGVLRAINPNDLAGNAGLCGGVLPPCGQSSSYWSSHGNSQTKHIVLGWIIGVSTIFAVAIGIFAARSLYMRWYTNGLCFFPKGFYKGNKQWPWQLMAFQRVDFTSADILSCIKDTNVIGMGATGIVYKAEITQSSTVVAVKKLWRSGSDIEAGSSDDLVGEVNLLGRLRHRNIVRLLGFLYNDADLMIIYEFMYNGNLGDALHGKQAGRLLVDWVSRYNIALGVAQGLAYLHHDCHPAVIHRDIKSNNILLDTNLEARIADFGLAKMMMHKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSYGVVLLELLTGKRPLDPEFGESIDIVGWIRRKIDNKSPKEALDPSVGSSKHVQEEMLLVLKIALLCTAKLPKDRPSMRDVIMMLGEARPRRKSAICNETSEANKEMQNISTSPVSGLI 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151469g00002 990 ProSitePatterns Protein kinases ATP-binding region signature. 687 711 IPR017441 GO:0005524
Stsc151469g00002 990 ProSiteProfiles Protein kinase domain profile. 681 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151469g00002 990 Gene3D Ribonuclease Inhibitor 135 228 IPR032675 -
Stsc151469g00002 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Stsc151469g00002 990 FunFam Leucine-rich receptor-like protein kinase family protein 135 232 - -
Stsc151469g00002 990 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 337 599 - -
Stsc151469g00002 990 SUPERFAMILY Protein kinase-like (PK-like) 673 956 IPR011009 -
Stsc151469g00002 990 Gene3D Ribonuclease Inhibitor 229 328 IPR032675 -
Stsc151469g00002 990 Gene3D Ribonuclease Inhibitor 30 134 IPR032675 -
Stsc151469g00002 990 FunFam Leucine-rich receptor-like protein kinase family protein 233 329 - -
Stsc151469g00002 990 SMART LRR_typ_2 166 190 IPR003591 -
Stsc151469g00002 990 SMART LRR_typ_2 358 382 IPR003591 -
Stsc151469g00002 990 SMART LRR_typ_2 310 334 IPR003591 -
Stsc151469g00002 990 SMART LRR_typ_2 262 286 IPR003591 -
Stsc151469g00002 990 SMART LRR_typ_2 406 430 IPR003591 -
Stsc151469g00002 990 SMART serkin_6 681 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151469g00002 990 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Stsc151469g00002 990 Gene3D Transferase(Phosphotransferase) domain 1 766 984 - -
Stsc151469g00002 990 Pfam Protein kinase domain 683 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151469g00002 990 FunFam MDIS1-interacting receptor like kinase 1 766 975 - -
Stsc151469g00002 990 Gene3D Phosphorylase Kinase; domain 1 681 765 - -
Stsc151469g00002 990 Gene3D Ribonuclease Inhibitor 333 599 IPR032675 -
Stsc151469g00002 990 SUPERFAMILY L domain-like 64 281 - -
Stsc151469g00002 990 FunFam MDIS1-interacting receptor like kinase 1 681 765 - -
Stsc151469g00002 990 SUPERFAMILY RNI-like 231 568 - -
Stsc151469g00002 990 Pfam Leucine rich repeat 456 515 IPR001611 GO:0005515
Stsc151469g00002 990 Pfam Leucine rich repeat 144 202 IPR001611 GO:0005515
Stsc151469g00002 990 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 67 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151469g00002 Stsc-Chr151469 18432 21837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151469g00002 12 990 Receptor kinase-like Gene Family AT1G08590 56.963 0.0 1096
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc151469g00002 Pkinase 6.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151469g00002 - - gmx:100788430 1526.15