Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151466g00009 ATGGTGCTTGCAAAAGGGAATAATAACAGCAACAAGAATGGTTATGTTAGAGAAGCTTGCAGTGTAACAAGGTACCAAGACTTGTGTGTCCATTCACTAGCACAATTCTCCAACACTGCTGGAAGAAGTCCTAGCAAGTGGGCACGTGCAGGGGTATCAGTAACAATAGGGGAGGTAAAGAAAATTCGAGCTTACTTGGCACAGTTGAAGAGGAACGGTGGATTCATGGGAAGAAACAGAGCTGCACTTTCAGATTGTGCTGAGGTTTTTGATGATGCACTTGATGAGCTTCATAGATCACTTGGTGTGCTAAGAAAGCTCAGCAAAACCACGTTTAGCACACAAATGGGGGATCTCAATACTTGGATAAGCGCGGCACTAACCGATGCAGACACTTGCCTTGATGGATTTCAAGACCAAGACAATCATAATAATAGTAATAACAATAAGAAGCAGATCAAGTTGCTGCAGAGTAGGGTGCAGAATGTGTCTTATATAACCAGCAATGCTCTTGCTCTTGTTAACAAGCTTGCTACCACCGGTATTGGAAGCAACCTTGATCAACACAAATCCTGA 576 0.4306 MVLAKGNNNSNKNGYVREACSVTRYQDLCVHSLAQFSNTAGRSPSKWARAGVSVTIGEVKKIRAYLAQLKRNGGFMGRNRAALSDCAEVFDDALDELHRSLGVLRKLSKTTFSTQMGDLNTWISAALTDADTCLDGFQDQDNHNNSNNNKKQIKLLQSRVQNVSYITSNALALVNKLATTGIGSNLDQHKS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151466g00009 191 Pfam Plant invertase/pectin methylesterase inhibitor 16 173 IPR006501 GO:0004857
Stsc151466g00009 191 NCBIfam pectinesterase inhibitor domain 9 177 IPR006501 GO:0004857
Stsc151466g00009 191 Gene3D Invertase/pectin methylesterase inhibitor family protein 11 179 IPR035513 -
Stsc151466g00009 191 SMART PMEI_2 11 173 IPR006501 GO:0004857
Stsc151466g00009 191 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 14 177 IPR035513 -
Stsc151466g00009 191 CDD PMEI-like_3 19 179 - -
Stsc151466g00009 191 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 173 - -
Stsc151466g00009 191 FunFam Pectinesterase inhibitor 3 11 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151466g00009 Stsc-Chr151466 36870 37445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151466g00009 16 188 Carbohydrate Esterase AT3G14310 34.463 1.43e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151466g00009 - - adu:107492431 310.457