Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151465g00002 ATGTGTCAGGTTGTGAAGGAAGAAGGGTGGGAACGGTTGTATGGAGGGTTGATGCCATCGTTAGTTGGCACTGCTGCATCTCAGGGTGTTTATTATTATTTCTATCACATATTCAGGAACAGAGCAGAAGAAGCTGCACTGACACAGAAAAAGATAGGCATCAGTGATGGATCAGTTGGAATGCTATCCTCTCTTTTCATTGCTGCTTTATCTGGGTCTCTTAATGTGCTTTTGACGAACCCTATATGGGTCGTTGTCACCCGTATGCAGACACAAAGAAAAGAGTCAAATAAAACAGATCCTGATATGGGATTGTTAGTTGTTGATGGTGAAAAAAGTCTTCCTCCTCCTGCAGATAAGCCTCTTCCTTATGACACTAAACATGTGATACAAGAAGTCTATGAAGAAGGTGGAATTGGCGGTTTCTGGAATGGTGTGTTACCATCATTGATCATGGTATGCAACCCTTCCATTCAGTTCATGCTGTATGAAACCATGTTGATAAAGATGAAAAGAAGACCTGATGGCAATAAGAAGGGTAGCAATGGAGTAACTGCTTTCGAGGTGTTTCTTCTTGGAGCTCTGGCTAAGCTTGGAGCTACTGTTGTAACTTATCCTCTTCTGGTTCTGAAGTCAAGGCTTCAAGCTAAACAGGACAAAACAGGGGACATCAGACACCGTTATAAAGGGACATGGGATGCAGTTATAAAGATGATAAACTATGAAGGGCTGTATGGATTCTACAAAGGCATAGGCACCAAAATTGTACAGAGTGTTCTTGCTGCTGCAATTTTGTTCATGATGAAGGAAGAACTAGTTAAGAGTGTTCAATCTTTGCTAGCTAAGGATGGCTCTAATGCCTTAAAGAGAAAGCAATTATGA 882 0.4138 MCQVVKEEGWERLYGGLMPSLVGTAASQGVYYYFYHIFRNRAEEAALTQKKIGISDGSVGMLSSLFIAALSGSLNVLLTNPIWVVVTRMQTQRKESNKTDPDMGLLVVDGEKSLPPPADKPLPYDTKHVIQEVYEEGGIGGFWNGVLPSLIMVCNPSIQFMLYETMLIKMKRRPDGNKKGSNGVTAFEVFLLGALAKLGATVVTYPLLVLKSRLQAKQDKTGDIRHRYKGTWDAVIKMINYEGLYGFYKGIGTKIVQSVLAAAILFMMKEELVKSVQSLLAKDGSNALKRKQL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151465g00002 293 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 280 IPR044712 GO:0006862|GO:0055085
Stsc151465g00002 293 ProSiteProfiles Solute carrier (Solcar) repeat profile. 59 169 IPR018108 -
Stsc151465g00002 293 Pfam Mitochondrial carrier protein 185 274 IPR018108 -
Stsc151465g00002 293 Pfam Mitochondrial carrier protein 59 167 IPR018108 -
Stsc151465g00002 293 SUPERFAMILY Mitochondrial carrier 2 271 IPR023395 -
Stsc151465g00002 293 ProSiteProfiles Solute carrier (Solcar) repeat profile. 184 275 IPR018108 -
Stsc151465g00002 293 Gene3D Mitochondrial carrier domain 1 278 IPR023395 -
Stsc151465g00002 293 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 41 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151465g00002 Stsc-Chr151465 2851 6983 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151465g00002 3 292 Chloroplast and Mitochondria Gene Families AT1G25380 24.573 5.71e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151465g00002 K13354 - gmx:100775784 435.261