Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151465g00001 ATGTCGGACGCTTTGATCAACGGATTGGCAGGTGCTGGGGGAGGGATCATTTCTCAGCTCATAACATACCCTCTTCTAACTGTAAACACTCGCCAACAAACCGATCGTGATGTGAGAAAAAGCAAGAGTAACTTTGGAACCCTCGAACAAATGTGTCAGGTTGTGAAGGAAGAAGGGTGGGAACGGTTGTATGGAGGGTTGATGCCATCGTTAGTTGGCACTGCTGCATCTCAGGGTGTTTATTATTATTTCTATCACATATTCAGGAACAGAGCAGAAGAAGCTGCACTGACACAGAAAAAGATAGGCATCAGTGATGGATCAGTTGGAATGCTATCCTCTCTTTTCATTGCTGCTTTATCTGGGTCTCTTAATGTGCTTTTGACGAACCCTATATGGGTCGTTGTCACCCGTATGCAGACACAAAGAAAAGAGTCAAATAAAACAGATCCTGATATGGGATTGTTAGTTGTTGATGGTGAAAAAAGTCTTCCTCCTCCTGCAGATAAGCCTCTTCCTTATGACACTAAACATGTGATACAAGAAGTCTATGAAGAAGGTGGAATTGGCGGTTTCTGGAATGGTGTGTTACCATCATTGATCATGGTATGCAACCCTTCCATTCAGTTCATGCTGTATGAAACCATGTTGATAAAGATGAAAAGAAGACCTGATGGCAATAAGAAGGGTAGCAATGGAGTAACTGCTTTCGAGGTGTTTCTTCTTGGAGCTCTGGCTAAGCTTGGAGCTACTGTTGTAACTTATCCTCTTCTGGTTCTGAAGTCAAGGCTTCAAGCTAAACAGGACAAAACAGGGGACATCAGACACCGTTATAAAGGGACATGGGATGCAGTTATAAAGATGATAAACTATGAAGGGCTGTATGGATTCTACAAAGGCATAGGCACCAAAATTGTACAGAGTGTTCTTGCTGCTGCAATTTTGTTCATGATGAAGGAAGAACTAGTTAAGAGTGTTCAATCTTTGCTAGCTAAGGATGGCTCTAATGCCTTAAAGAGAAAGCAATTATGA 1032 0.4215 MSDALINGLAGAGGGIISQLITYPLLTVNTRQQTDRDVRKSKSNFGTLEQMCQVVKEEGWERLYGGLMPSLVGTAASQGVYYYFYHIFRNRAEEAALTQKKIGISDGSVGMLSSLFIAALSGSLNVLLTNPIWVVVTRMQTQRKESNKTDPDMGLLVVDGEKSLPPPADKPLPYDTKHVIQEVYEEGGIGGFWNGVLPSLIMVCNPSIQFMLYETMLIKMKRRPDGNKKGSNGVTAFEVFLLGALAKLGATVVTYPLLVLKSRLQAKQDKTGDIRHRYKGTWDAVIKMINYEGLYGFYKGIGTKIVQSVLAAAILFMMKEELVKSVQSLLAKDGSNALKRKQL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151465g00001 343 Gene3D Mitochondrial carrier domain 9 335 IPR023395 -
Stsc151465g00001 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 234 325 IPR018108 -
Stsc151465g00001 343 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 330 IPR044712 GO:0006862|GO:0055085
Stsc151465g00001 343 Pfam Mitochondrial carrier protein 109 217 IPR018108 -
Stsc151465g00001 343 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Stsc151465g00001 343 Pfam Mitochondrial carrier protein 235 324 IPR018108 -
Stsc151465g00001 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 219 IPR018108 -
Stsc151465g00001 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Stsc151465g00001 343 SUPERFAMILY Mitochondrial carrier 3 321 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151465g00001 Stsc-Chr151465 2851 7002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151465g00001 53 342 Chloroplast and Mitochondria Gene Families AT1G25380 24.573 1.09e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151465g00001 K13354 - gmx:100775784 493.426