Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151464g00001 ATGAAGCAGAAAAATCAAAACGTTTCTGTTGTACTTGTCCTCGCTGCATTGTTGTTTGCAGGCACATTGTCATCAGTGTGTGCCTCAACAAACTTCAATCGCGAACTGAGAGATGCAGAAACCATATACTTTAAGCAACGACAGCTACTCACCTACAGGGATGAGTTTGGCGACAGAGGAGAGAATGTTACAGTAGACCCTTCTCTGGTGTTTGAGAACGACCGTATAAGAAACGCCTACATTGCTTTGCAAGCATGGAAGCAAGCCATTCTCTCCGATCCTTTCAACTTCACCGCAAACTGGGTAGGATCTGATGTGTGCAACTACCAAGGGGTCTATTGTGCACCGGCAGTGGACAACCCCAGGATCCGCACCGTTGCCGGCATTGATCTGAACCACGCAGACATTGCTGGCTACTTGCCCGAAGAGCTTGGCCTCCTTGTGGATCTGGCTCTCTTCCACATTAACTCAAACAGGTTCTGTGGCACATTGCCACACAGCTTTCAAAGGCTCAAGGTATTGTTTGAACTGGATCTCAGTAACAACCGCTTTGCGGGCAAGTTCCCTACGGTTGTTCTGAGGCTCCCAACGCTCAAGTTCTTGGATCTGAGGTTCAACGAGTTCGAAGGTGGGGTCCCCAGGGAGCTGTTTGACAAAGATCTTGACGCCATTTTCCTCAATCACAACAGGTTCGTCTTTGAGATTCCTGATAACTTGGGAAACTCGCCGGTTTCCGTTATTGTGCTGGCCAACAACAGGTTCCATGGTTGCATCCCTGCCAGCATTGGCAACATGTCAAACCTCAACGAGATCATTCTTATGAACAATGAGCTCAGGGCCTGCTTGCCTTCCGAGATTGGCTTGTTGAAGAACCTCACCGTCTTTGATGTCAGCTTCAACCAGCTCTTAGGACCGTTGCCCAACGCCATTGGAGGAGCTGTGAGCTTGGAGCAGTTGGACGTGGCACACAACTTGCTCTCCGGGAACATTCCGGCCAGTATATGCATGCTGCCAAATCTTCAGAACTTTACGTATTCTTATAACTTCTTCACAGGGGAGCCACCGCCATGCCTGAGGGTGGGGTCGTTTGATGACCGGAGAAACTGCTTGCCGGCGAGGCCGTTGCAGAGGTCAGCAGCGCAATGTAGTGCATTCTTGTCTAAGCCTGTGGACTGTAACTCTTTTGGTTGCAGGCCATTTAATCCTTCCCCTTCTGCACCTTCACCTTCTTCTTCGCCGCCATCTACTCCTTCACCTTCTCTGCCTTCTCCCTCTTCCCCACCTTCTCCACCATCACCACCATCTACTCCTTCGCCTTCTTCGCCACCTGCACCTGGACAAGGTCCTCCTTCATCTACTCCTACTACTCCCGTACCTTCTCCACCTGGAAGTGAACCTTCCCCTATATATAGACCACCCTCTCCTCCCCCCACATCACCATCACCATCACCACCATCAACATCGCCACCATCAACATCACCACCATCACCATCACCTATAGTGGTTCCTTCACCACCATCCCCTGTTTACACACCACATTCTCCTCCTCCGCCACCCCCGCTTTACTCTCCTCCATCACCCCCGCCATCCCCAGTCCATACATCACCTCCATCTCAGCCTTCACCTAACCCAACTCCAACATACTGTGTACGGTCGCCACCTCCTCCGCCGCCAAATTCTCCACCTCCACCTGCTCCTGAATTAACCCCGCCCCCACCTTCGCCTTATTATTACAACTCACCGCCACCTCCAACACACTCACCTCCGCCACCTCCAACACACTCATCTCCGCCACCTCCCACACACTCACCTCCTCCACCCACATATGCCTACCAATCACCGCCACCTCCACCGCCAGTACATTCGCCGCCTCCACCATCCCCACCACCCTGCATAGAACCTCCTCCACCGGTCCACTATAGTTCTCCACCACCCCCAGTCCAATACAGTTCACCACCACCACCACCAAGCCCTGTTCATTATAGTTCTCCGCCGCCACCAGCTTCTCCACCACCATGCGAAGAAACTCCACCGCCTCCGCCCCTTACACCACCACCATGCGAAGAAAATCCATCTCCAGCCCCTGTATATGAAGGGCCATTGCCGCCTGTCATCGGAGTCCCATACTCATCGCCTCCACCACCACCTTTCTATTAA 2157 0.5262 MKQKNQNVSVVLVLAALLFAGTLSSVCASTNFNRELRDAETIYFKQRQLLTYRDEFGDRGENVTVDPSLVFENDRIRNAYIALQAWKQAILSDPFNFTANWVGSDVCNYQGVYCAPAVDNPRIRTVAGIDLNHADIAGYLPEELGLLVDLALFHINSNRFCGTLPHSFQRLKVLFELDLSNNRFAGKFPTVVLRLPTLKFLDLRFNEFEGGVPRELFDKDLDAIFLNHNRFVFEIPDNLGNSPVSVIVLANNRFHGCIPASIGNMSNLNEIILMNNELRACLPSEIGLLKNLTVFDVSFNQLLGPLPNAIGGAVSLEQLDVAHNLLSGNIPASICMLPNLQNFTYSYNFFTGEPPPCLRVGSFDDRRNCLPARPLQRSAAQCSAFLSKPVDCNSFGCRPFNPSPSAPSPSSSPPSTPSPSLPSPSSPPSPPSPPSTPSPSSPPAPGQGPPSSTPTTPVPSPPGSEPSPIYRPPSPPPTSPSPSPPSTSPPSTSPPSPSPIVVPSPPSPVYTPHSPPPPPPLYSPPSPPPSPVHTSPPSQPSPNPTPTYCVRSPPPPPPNSPPPPAPELTPPPPSPYYYNSPPPPTHSPPPPPTHSSPPPPTHSPPPPTYAYQSPPPPPPVHSPPPPSPPPCIEPPPPVHYSSPPPPVQYSSPPPPPSPVHYSSPPPPASPPPCEETPPPPPLTPPPCEENPSPAPVYEGPLPPVIGVPYSSPPPPPFY 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151464g00001 718 SUPERFAMILY L domain-like 80 356 - -
Stsc151464g00001 718 Pfam Leucine rich repeat N-terminal domain 82 114 IPR013210 -
Stsc151464g00001 718 FunFam Leucine-rich repeat extensin-like protein 1 80 241 - -
Stsc151464g00001 718 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 21 566 - -
Stsc151464g00001 718 Gene3D Ribonuclease Inhibitor 79 244 IPR032675 -
Stsc151464g00001 718 FunFam Leucine-rich repeat extensin-like protein 5 242 381 - -
Stsc151464g00001 718 MobiDBLite consensus disorder prediction 403 718 - -
Stsc151464g00001 718 Gene3D Ribonuclease Inhibitor 245 370 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151464g00001 Stsc-Chr151464 22867 25023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151464g00001 2 397 Trihelix Transcription Factor Family AT4G18670 74.055 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151464g00001 - - gmx:100814585 641.343