Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151453g00005 ATGGAGTTTTTCTTTACTGCGTTACCAGAATTCTGCTCATTCGTTTTGCAAATTCTGCTCAAGTTTTACCAGGATCTCAATTCCATTGATGAGGTTGGGCAATTGGATGATCATTTTGAGGATTTGAATTCCATTAATGAGGTTCGACAATTGGAAGATCAAACAGAGTTTTTGTGTAATGTTGATGAAGAGTATGTCCCCAAGGTTGGGATGACATTTAAGTCATGTACAGAAGCTAGTGAATTCTACAAGGAGTATGCTAAACGAGCTGGATTTTCTTCCAAAATCAGAAATTCACAAAGGAATAAAGAGACCGGTGCAATCAAGAATCAACTCTTCACATGTAAGAGAAAGGGAAAAAGGAGATCTGACATTCTTGAGGCGGAAAAGACGAACCCGATGTCTCCGGCAAATTGTCCGGCAAGGATGTTCGTTCATATCGATAAGTTGACTCAGCGTTATGTTATTTCCAAAGTTGTATTGAAGCATTCGCATCCTTTTTCTGCCGATCTTGCAGAGATGCTACCTCAACACAGAGAACTCAGCATGTACGTTCGTCACGTCATTGTGAACAACGATCAGGCAGGCATCTGA 594 0.4057 MEFFFTALPEFCSFVLQILLKFYQDLNSIDEVGQLDDHFEDLNSINEVRQLEDQTEFLCNVDEEYVPKVGMTFKSCTEASEFYKEYAKRAGFSSKIRNSQRNKETGAIKNQLFTCKRKGKRRSDILEAEKTNPMSPANCPARMFVHIDKLTQRYVISKVVLKHSHPFSADLAEMLPQHRELSMYVRHVIVNNDQAGI 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151453g00005 197 Pfam FAR1 DNA-binding domain 81 167 IPR004330 -
Stsc151453g00005 197 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 36 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151453g00005 Stsc-Chr151453 39138 40387 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151453g00005 FAR1 2.8e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151453g00005 - - adu:110280446 154.451