Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151452g00002 ATGATGAACAACAAGCCTTGGAAATTCTTTCACAAGGAAGTAGCTCCCTTCACTGCACTGGTAATAGTGCAGTTCACTGAGGTTGGTGTGAATATTCTATCCAAGGAAGCCACTACCAAGGGGTTGAGCTACTATGTCTTTGTCTTCTATTCCTTGGTTATCACCGATCTCATTCTGCTTCTTTCTTTGCCTTTCTTCATCCGCAGGTCAACTGGGCTTCCCCCACTTAATTTTTCTCTTCTCTGCAAAATTTTCTCCTTGGGTGTGCTTGTATTTTCAGCTCAGATTTGTGGAAATAAAGGTATTAAGTTCAGTTCGCCAAGTCTTGCTTCTGCTGTTGGCAACCTCGTTCCAGCGTTTATATTCATACTTGCTGTCCTTTTCAGGTTGGAAAACATTACTCTAAGGAGTTCAAGCACTCAGGCAAAAATTTTGGGTTCAGCTGTATCAATTGCTGGTGCATTCATAGTTATTTTCTACAAAGGACCAACAATCTGGAATGATGCTTCACCATCACCATCCCCCTCATTGAATTCGCCACTTCGCTCTTCACAATGGAGTTGGATTTGGGGTGGATTCCTACTAGCACTAGCCTATATTCTAGTGTCAATTTGGTACATTCTACTGACCCACGTCATAAAAATTTATCCAGCAAAGATGATTGTGGTATTCTTGTTCACCTTGTTTGGGACTATCATAGCTGCCCCAGTCTGTTTTCTAGCGGAAAACAACTTGAGTGCTTGGAGACTAAAACCCGATATAACATTGGTGGCTGTTATATACTCGGGATTTTTTTGCACGTTCTTCAGCACTGTGGTTCACACATGGTGTCTGCACCTAAAAGGCCCCGTATATGTATCAATCTTTAAGCCCCTCTCAATTGTCATTGCTACTACTATGAGTGTCATATTCCTTGGTGAAGCCTTGTATCTTGGAAGTGTTGTTGGAGCAGTGATACTGGCTGCTGGGTTTTATTCTGTTATATGGGGAAAAGCAAAAGAAGAGGAATTGCTTGAAGATGAGAACTACTTGTCAGGTAGTAGTAACTCAGGATCCCAATCAAATGGTAAGGTTCCTTTGTTACAAAGTTGCAAGAGCGGAGATGTTTAA 1110 0.4171 MMNNKPWKFFHKEVAPFTALVIVQFTEVGVNILSKEATTKGLSYYVFVFYSLVITDLILLLSLPFFIRRSTGLPPLNFSLLCKIFSLGVLVFSAQICGNKGIKFSSPSLASAVGNLVPAFIFILAVLFRLENITLRSSSTQAKILGSAVSIAGAFIVIFYKGPTIWNDASPSPSPSLNSPLRSSQWSWIWGGFLLALAYILVSIWYILLTHVIKIYPAKMIVVFLFTLFGTIIAAPVCFLAENNLSAWRLKPDITLVAVIYSGFFCTFFSTVVHTWCLHLKGPVYVSIFKPLSIVIATTMSVIFLGEALYLGSVVGAVILAAGFYSVIWGKAKEEELLEDENYLSGSSNSGSQSNGKVPLLQSCKSGDV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151452g00002 369 PANTHER WAT1-RELATED PROTEIN 15 341 IPR030184 GO:0016020|GO:0022857
Stsc151452g00002 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 333 - -
Stsc151452g00002 369 Pfam EamA-like transporter family 31 158 IPR000620 GO:0016020
Stsc151452g00002 369 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Stsc151452g00002 369 MobiDBLite consensus disorder prediction 343 369 - -
Stsc151452g00002 369 MobiDBLite consensus disorder prediction 343 361 - -
Stsc151452g00002 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151452g00002 Stsc-Chr151452 13880 22049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151452g00002 7 350 Nodulin-like Gene Family AT5G40240 53.314 4.27e-125 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151452g00002 - - gmx:100805667 414.846