Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151447g00009 GGTACAACTGTCAAAGGAGCAGTGGATGATCTTGATCTGGTGATAAAGACACTTGAAGATACTGGATTTTCACGTGACAAATTCTACATCCATTGTGACGGGGCCTTGTTTGGTCTCATGATGCCTTTTGTGAAACTTGCACCAAAAGTTTCTTTTAAGAAGCCCATTGGTAGTGTTAGTGTGTCCGGCCACAAGTTTGTGGGGTGCCCAATGCCTTGTGGTGTTCAAATAACAAGATTGGAGCATATCAATGCCCTTTCCAGGAATGTAGAATACCTTGCTTCTAGGGATGCCACAATCATGGGTAGCCGGAATGGCCATGCTCCCATATTCCTTTGGTATACCCTTAACCGGAAAGGATACAGAGGTTTCCAGAAGGAAGTGCAGAAATGCCTGAGGAATGCATACTATTTCAAGGACCGCCTTAGGGAAGCCGGAGTTGGTGCAATGCTTAATGAGCTGAGCAGCACGGTTGTGTTTGAGAGGCCTCACGATGAGGAGTTTGTACGCAAGTGGCAGTTGGCATGCCAGGGAAACATAGCACATGTGGTGGTGATGCCAAACGTCACTAAGGACAAGCTTGATGAATTTCTGAACGAGCTTGTGGAGAAGCGTGGTCAATGGTTCAAAAATGGGGAGTTTCAACAATATTGCATTGCATCAGAAGTGGGTGAAACCTGTTGCCTTTGCCCTTTGCACAAGTGA 705 0.4624 GTTVKGAVDDLDLVIKTLEDTGFSRDKFYIHCDGALFGLMMPFVKLAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAYYFKDRLREAGVGAMLNELSSTVVFERPHDEEFVRKWQLACQGNIAHVVVMPNVTKDKLDEFLNELVEKRGQWFKNGEFQQYCIASEVGETCCLCPLHK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151447g00009 234 Gene3D - 1 116 IPR015421 GO:0003824
Stsc151447g00009 234 Pfam Pyridoxal-dependent decarboxylase conserved domain 1 157 IPR002129 GO:0016830|GO:0019752|GO:0030170
Stsc151447g00009 234 SUPERFAMILY PLP-dependent transferases 1 206 IPR015424 -
Stsc151447g00009 234 Gene3D Aspartate Aminotransferase, domain 1 117 205 IPR015422 GO:0003824
Stsc151447g00009 234 PANTHER - 1 234 - -
Stsc151447g00009 234 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 58 79 IPR021115 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151447g00009 Stsc-Chr151447 44088 45455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151447g00009 1 140 Calmodulin-binding Proteins AT1G65960 27.517 3.67e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151447g00009 K25193 - gmx:100785163 426.402