Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151447g00008 ATGGATCTGGAGAAACAGAATAATAAAGAGCAAGAGGTGCCGGTGGCGATGGTAGAAACCGAGGAGGTGGAGGTTTTTGACTATACCAAGAGGGCACAGTGGCTTAGGGCTGCAGTTTTGGGTGCAAATGATGGCTTGCTATCAACAGCATCCCTCATGATGGGCGTTGGAGCCGTCAAACAAGATGTCAAGACCATGATCCTCACCGGAGTCGCCGGTTTGGTGGGCGGAGCTTGTAGCATGGCCATCGGAGAGTTTGTCTCCGTTTATTCTCAATATGATATTGAGTTTGCTCAGATGAAGAGAGAAGGAAACACACAAGGCAAAGACAAGCTTCCCAACCCTTATACTGCCGCCGTGGCCTCCGCCGTCGCCTTCGCTGTTGGGGCCTTGGTGCCCCTCCTTGGAGCCGCCTTCATAAAAGATTATAAGGTTAGGTTGGGGGTGGTGGTGGCCGTGGTTAGCCTTGCCTTGTTGGTGTTTGGAGGGTTAGGTGCTGTTTTAGGGAAAGCACCTTTTGTGAAGTCATCTTTGAGGGTTTTGATCGGTGGATGGTTGGCTATGGCGGTTACTTTTGGTTTAACCAAGTTGGCTGGTCACGTTGGAGTTTGA 612 0.5082 MDLEKQNNKEQEVPVAMVETEEVEVFDYTKRAQWLRAAVLGANDGLLSTASLMMGVGAVKQDVKTMILTGVAGLVGGACSMAIGEFVSVYSQYDIEFAQMKREGNTQGKDKLPNPYTAAVASAVAFAVGALVPLLGAAFIKDYKVRLGVVVAVVSLALLVFGGLGAVLGKAPFVKSSLRVLIGGWLAMAVTFGLTKLAGHVGV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151447g00008 203 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 17 198 IPR008217 GO:0005384|GO:0030026
Stsc151447g00008 203 Pfam VIT family 100 195 IPR008217 GO:0005384|GO:0030026
Stsc151447g00008 203 Pfam VIT family 35 105 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151447g00008 Stsc-Chr151447 37380 38299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151447g00008 18 203 Nodulin-like Gene Family AT3G43660 73.262 2.14e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151447g00008 K22736 - qsa:O6P43_012275 258.07