LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc151447g00005	ATGGTACTATTTCAATCATTTCTATGCGGCTTATTCGGAGGAGCATTATCTCAAAATTTATACCTGGAGGCTCTGGCTTTAACTACTGCAACATTTGTATCCGCCACGACCAACCTCTTGCCAGCTATTACCTTTATCATGGCCCTTTGCATACGGATGGAAAGATTGAATTTGGGATCAGCAGGAGGGCATGCGAAGATAATTGGAACAGTGATTGGACTTGGTGGGGCAATGGTGCTAACTTTCGTCAAAGGTCCAGAAATCCATACGGCATTCCACACAAACCTCCTGTTGCATCACAAAAACAATAGTAGCATAGCTAGTAATGGTGGTGGCGGTGGCAGATGGGTGTTGGGTTCTGCGTGCGCGTTGGGGTGCGGGATCTCTTATGCGTTGTGGCTGATGATACAGGCAAAGATGAGTGAGAGGTACCCAAGCTACTATTCAAGCACTGCCCTCGTATCTCTTTGGGCGGCCCTCTTGTCCACCGTGTACGCGCTTTCCCTTGAGAAGGATTGGAGTCAGTGGAGACTGGGTTGGAATATTAGGCTTCTCACGGTGGCTTATTCAGGGATCGTGGTTTCTGGAATGATGATGGCTGTGATGTCGTGGTGCGTACACGTGAGAGGGCCCTTGTTTGTCTCTGTTTTTAGCCCTCTCGTGGTCGTGATTGTAGCAATAGCTGGTTTCACCATGTTGAACGAGAATCTATACCTGGGAAGCATAATTGGAGCAATGTTGATTGTGTGTGGGCTATACTCTGTTCTCTGGGGTAAAAGCAAAGAGATGAATAAGACCAACAAGAGTCCTCATGATGATGATGATGATGATGGTGACACACTACAAGTCATTACTGTGACAAGTTCTAATGCCACGAATTATGCGGTCAGGGATAACCAAGATTCAACAGAGGATTAG	918	0.4673	MVLFQSFLCGLFGGALSQNLYLEALALTTATFVSATTNLLPAITFIMALCIRMERLNLGSAGGHAKIIGTVIGLGGAMVLTFVKGPEIHTAFHTNLLLHHKNNSSIASNGGGGGRWVLGSACALGCGISYALWLMIQAKMSERYPSYYSSTALVSLWAALLSTVYALSLEKDWSQWRLGWNIRLLTVAYSGIVVSGMMMAVMSWCVHVRGPLFVSVFSPLVVVIVAIAGFTMLNENLYLGSIIGAMLIVCGLYSVLWGKSKEMNKTNKSPHDDDDDDGDTLQVITVTSSNATNYAVRDNQDSTED	305

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc151447g00005	305	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	6	82	-	-
	Stsc151447g00005	305	PANTHER	WAT1-RELATED PROTEIN	4	268	IPR030184	GO:0016020\|GO:0022857
	Stsc151447g00005	305	Pfam	EamA-like transporter family	119	256	IPR000620	GO:0016020
	Stsc151447g00005	305	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	180	261	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc151447g00005	Stsc-Chr151447	24745	26434	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc151447g00005	13	282	Nodulin-like Gene Family	AT1G68170	43.571	1.43e-69	218

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc151447g00005	-		-	aip:107620100	413.305