Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151447g00002 ATGAAGAATATGTTGAAGGTGGTGGAAGTGTTGAAGCCGGTGGTGCTGATGGTGGTTGTTCAAATAGCAAATGCATGGGTGAATGTTCTCTACAAGCTTGCTGTGAACGATGGCATGAGTCTAAGAGTGGTTGTTGCTTACCGCTACATCTTCGCTACTGCTTTCATTGCTCCTCTTGCTTATATTCTCGAGAGGAAGACAAGGACAAAGATGACTTGCACAATTCTCTTTCAATCATTCTTGTGCGGTTTATTTGGGGGAGCATTGCCTCAGAACTTACAAATGGAAGCACTTGCTTTAACTTCTGTAACATTTGCAACTGCCATATCCAACCTCGTTCCAGCCATCACCTTTATCTTGTCCCTCTCCTTCGGAATGGAGAGATTGAATCTGAGAAAAGCAGCAGGGAAGGCAAAGATAATAGGAACATTGACTGGAATTGGTGGTGCAATGTTGATGACATTCTATAGAGGCGTCCAAGTTAACATCTTATCCTTCCACATTAACCTCTTCAATAATAATCATAACAATCACCCAAAATCACACGGTAGTGGTAGTGGAAGTGGAGGGTTGTTCTTGCTTGGTGCTCTGTCTTCCTTCTCAAGCAACGCCTCTTATGCATTGTGGCTCATCATTCAAGCTAAGATGAGTAGAGCATATCCATATCCATATTCAAGCACTGCTCTCATGTGTGTAATGGGAGCAATCTTATCTGTCACCTTCACTTTTTGTCTTGAGAGGGATTTGAGTCAGTGGAAGTTGGGTTGGAATGTTAGGCTACTCACTGTAGCTTATGCGGGTATAGTGGTTTCCGGAATAATGGTGGCTGTAATATCATGGTGCGTACGTATGAGAGGTCCATTGTTTGTCTCTGTTTTTAGCCCTCTCATGCTCGTCGTTGTTGCCTTTGCTGGATCCACCATTCTTGATGAGAACCTCTACCTTGGAAGCATAATGGGATCATTGCTGATTGTGTGCGGGTTATACCTGGTTCTATGGGGGAAAAGCAAAGAGATGGTGAAGAATCAGTTAGTGCCATCAAAAAGTGACAAACTTGAAATAGTGGTCAAATCTCAAGATTCATTAAAAAACAACGGAGGTGAAGAAGACCGTGTTACACTTACACACATGCACCACAACAATAGGACGGAAAAAGAAGGAGAACAAAATTAG 1173 0.4271 MKNMLKVVEVLKPVVLMVVVQIANAWVNVLYKLAVNDGMSLRVVVAYRYIFATAFIAPLAYILERKTRTKMTCTILFQSFLCGLFGGALPQNLQMEALALTSVTFATAISNLVPAITFILSLSFGMERLNLRKAAGKAKIIGTLTGIGGAMLMTFYRGVQVNILSFHINLFNNNHNNHPKSHGSGSGSGGLFLLGALSSFSSNASYALWLIIQAKMSRAYPYPYSSTALMCVMGAILSVTFTFCLERDLSQWKLGWNVRLLTVAYAGIVVSGIMVAVISWCVRMRGPLFVSVFSPLMLVVVAFAGSTILDENLYLGSIMGSLLIVCGLYLVLWGKSKEMVKNQLVPSKSDKLEIVVKSQDSLKNNGGEEDRVTLTHMHHNNRTEKEGEQN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151447g00002 390 MobiDBLite consensus disorder prediction 362 390 - -
Stsc151447g00002 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 142 - -
Stsc151447g00002 390 PANTHER WAT1-RELATED PROTEIN 12 347 IPR030184 GO:0016020|GO:0022857
Stsc151447g00002 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 336 - -
Stsc151447g00002 390 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020
Stsc151447g00002 390 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151447g00002 Stsc-Chr151447 6365 11431 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151447g00002 1 365 Nodulin-like Gene Family AT1G68170 44.658 4.19e-104 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151447g00002 - - gmx:100788378 494.967