Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151445g00004 ATGGCTGATGAACCACTAAACGATACTAACGAGGAGGTTCCAAAGCTTCATAGCAGGGTGTTCAACATTCTACTTGAGAATAATCCTGAACTTGCCGGAGACAGGCGGGGAACTGTTTTGAGACCTCCACAGCCAGAGCCCAACCAGGGCCTAGCCGGGCTCAGGGACTTTTTCTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGATCCATCGACAACCAGACCATGTTATAGCTTTCTTGCTTGCTGATCTTCGTACAAAGGGCTCTTTGGATGGACAGCAACGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGCAACACTGCGACGATATATCATTAAATGA 354 0.4831 MADEPLNDTNEEVPKLHSRVFNILLENNPELAGDRRGTVLRPPQPEPNQGLAGLRDFFSSCCSPPKGRIHRQPDHVIAFLLADLRTKGSLDGQQRLVVKGRFAPKNFEATLRRYIIK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151445g00004 117 Pfam Domain found in IF2B/IF5 68 116 IPR002735 GO:0003743|GO:0006413
Stsc151445g00004 117 Gene3D - 58 117 - -
Stsc151445g00004 117 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 15 116 IPR045196 GO:0003743|GO:0006413
Stsc151445g00004 117 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 21 116 IPR016189 GO:0003743|GO:0006413
Stsc151445g00004 117 SMART eIF2Bneu4 35 117 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151445g00004 Stsc-Chr151445 10982 14677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151445g00004 15 115 Eukaryotic Initiation Factors Gene Family AT5G20920 63.366 1.27e-35 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151445g00004 K03238 - egr:104419458 125.561