Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151443g00004 ATGTCAGACCCAAATTCAGTTGATGTGATTTTGGAATTTCTGAGGAGGAACCGGTTCACCCGGGCCGAGGCAGCATTGCGCAGTGAACTTGGTAACCGTTCTGATGTGAATGGGTTCCTTCAGAAGCTTAAATTGGAAGAAAAGGAATTGTGTGATGTGTCGCATGAGGATAAAGGGACGCTGGTGCTAGAAAACCGCGGGTCGGATTCTCGTGATAGTGTTGATGGTTCTAAAGAGCTGATTGTGAAGGAAATAGAGTATGGAACTAGTAGAAATAATGTTGAAAGCAAACGGAAAGCTTCAGCTTCTACGGGGGAGCGTAATCAGTCTAACGAAGTAGGTGGGACAAGTGACAAAAACTTCAGTTTCTCAAAGGGTTCGGAGGACAATCTACTTGATTTGAACTCATGGAAGTTCGGCCCTGGAAATGGTCCAGCTGAGCCTTACCAAACTTATGGTGGGAGTGGGGCTAGTAATGTGTTGAAGACCCCAATGTCTCAGCAATCAAAATCTCTAACAAGTGAAGTTATTGATTCAGCCAACAGGAAAGTGAAATCCGGGGAGGAAAATGCTGTGCCTACTGAAAGAAATTCCACTTGGCTTGGAAGTAGTAGTAAAGCCACTGCTGAACCAAAGTATGAGCTTATTCAAAGCAAAGAACCTAGGGAACTGGATCGACAGCTAAAATTTAGAAAGTTGCAAGGCAGTTCCGAGCAGAATAACTTCGGCAGCCTAAGTTTCCCTCTTGCACCAGAGAACCAGAAGGAAGAATTTCCTCGGCTTCCTCCTGTTAGAATCAAGTCAGAAGATAAGCAGTTGGCCGTTAATTGGGAGGAGAAGTTTGAGCGTGATGGACTGTCAGCGAAACTCAGTGGAACTGACAACACTTTGCTTATTGGGTCATATTTGGATGTGCCCATTGGACAAGAAATTAAAACTGCAGGTATGAGGAGGCCTGCAGGGGGTAGTTGGCTGTCTGTGAGTCAAGGGATTGTGGAGGATACGTCTGATCTTGTATCTGGTTTTGCAACAATTGGCGATGGCTTGAGTGAATCTATTGACTATCCAAATGAATATTGGGACTCTGATGAATATGACGACGATGACGATGTCGGGTACGTGAGACAACCCATCGAGGATGAGGCCTGGTTTTTGGCCCATGAAATTGATTACCCTAGTGACAATGAAAAGGGGACAACACATGGAAGTGTTCCAGATCCTCAGGAAAGAGGCCCGGCCAAAGATGACGATGATGATCAGTCTTTTGCCGAGGAGGATTCTTATTTCTCTGGCGAGCAATATCTTCATGCAAAGAATGCCGAGCCAGTCACTGCTTCGGATGATCCCATTGGGCTTACAGTTACTGAAATGTATGGAGGAATGAATGATATTGATTCAATGGGTCAATACAATGGACAATTGATCGATGATGAAGAATTGAATCTGATGCGAGTGGAACCTGTATGGCAGGGGTTTGTCTCCCAGACAAATGATCGCACCATGCTAGGAAACGGGAAGCTTTTAAATGATGGTGGAAGATCACGACTTGAAGATATCTCTATGGAAGATGATCAGCATGGTTCGGTTAGGTCAATTGGAGTGGGGATTAACAGTGATGCTGCTGACTTTGGCAGTGAAGTGCATGGAAGTTTGATTGGGGGTAGTAGCGAAGGGGATTTAGAATATTTCCGTGATCGTGATGTTGGGCTTGGTGGCTCCAGACACACTCATGATTTGGATAACAATTCGAACAAATCGATCAAAAGCAAGAAGAAAAGTGACAAGAGTGAGTCGAATAAATACATCATTGGGGGTGATAAAGATGCATTACACATAAAAACGAATAATGATGTGAACTTCTCATTCCCCCAAACTTTAAATGATGGCCGGATAATTCAAGCTGGTCCTAGTCATGCCAAGCTAGAAGAGGATGAAAAAGGTGGCACCGAAAGGGAAGATGAACTAGGTGCTTCACTAGACGATGAAGAAGCTGCTGCTGTGCAAGAGCAGGTAAGGCAAATAAAAGCCCAGGAGGAGGAGTTTGAAACCTTCAATCTGAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAAGACAAGCATTTCCATGTTGTTTTGAATTCTGTAATAGCCGGCCGTTATCATGTCACTGAGTATCTGGGATCTGCTGCATTTAGCAAAGCCATACAAGCTCATGACCTGCACACGGGCATGGATGTTTGTGTTAAAATTATAAAAAACAACAAGGACTTCTTTGACCAAAGCCTTGATGAAATCAAGCTTCTGAAGTATGTCAATAAGCACGATCCTGCTGACAAGTATCACCTTCTGCGATTATATGATTATTTCTATTATAGAGAACATTTGTTGATCGTATGTGAGCTACTTAAAGCCAATTTGTACGAGTTTCATAAATTCAACAGAGAATCAGGGGGGGAAGTCTACTTCACAATGCCTAGATTACAGTCAATTACCATTCAGTGTCTGGAAGCACTTCAGTTTTTGCACAGCCTTGGACTAATACATTGCGATCTAAAACCGGAGAACATCTTGGTTAAAAGCTATAGCAGATGCGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACGGATCACCTTTGCTCCTATGTTCAGTCCAGGTCCTATCGTGCACCTGAGGTCATTTTGGGACTTTCATATGACAAGAAGATTGATATTTGGTCACTTGGATGCATCTTGGCGGAACTTTGCACTGGCAATGTTCTTTTCCAAAATGATTCCCCTGCAACATTACTCGCTCGGGTGATTGGGATCATTGGTCCAATTGATCAAAGTATGCTTGCAAAGGGACGAGATACATACAAGTACTTCACCAAAAATCATATGCTTTATGAACGGAATCAGGAATCCAACAAGTTAGAATACCTGATCCCAAAAAAGACATCATTGAGGCATCGATTGCCGATGGGAGACCAAGGTTTCATTGACTTCGTTGCTCATTTGCTCGAGGTTAACCCAAAGAAGCGGCCCTCTGCGGCTGAGGCCTTGAAGCACCCTTGGTTATCATACCCGTATGAACCCATATCATCTTGA 3081 0.4362 MSDPNSVDVILEFLRRNRFTRAEAALRSELGNRSDVNGFLQKLKLEEKELCDVSHEDKGTLVLENRGSDSRDSVDGSKELIVKEIEYGTSRNNVESKRKASASTGERNQSNEVGGTSDKNFSFSKGSEDNLLDLNSWKFGPGNGPAEPYQTYGGSGASNVLKTPMSQQSKSLTSEVIDSANRKVKSGEENAVPTERNSTWLGSSSKATAEPKYELIQSKEPRELDRQLKFRKLQGSSEQNNFGSLSFPLAPENQKEEFPRLPPVRIKSEDKQLAVNWEEKFERDGLSAKLSGTDNTLLIGSYLDVPIGQEIKTAGMRRPAGGSWLSVSQGIVEDTSDLVSGFATIGDGLSESIDYPNEYWDSDEYDDDDDVGYVRQPIEDEAWFLAHEIDYPSDNEKGTTHGSVPDPQERGPAKDDDDDQSFAEEDSYFSGEQYLHAKNAEPVTASDDPIGLTVTEMYGGMNDIDSMGQYNGQLIDDEELNLMRVEPVWQGFVSQTNDRTMLGNGKLLNDGGRSRLEDISMEDDQHGSVRSIGVGINSDAADFGSEVHGSLIGGSSEGDLEYFRDRDVGLGGSRHTHDLDNNSNKSIKSKKKSDKSESNKYIIGGDKDALHIKTNNDVNFSFPQTLNDGRIIQAGPSHAKLEEDEKGGTEREDELGASLDDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKHFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQESNKLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSAAEALKHPWLSYPYEPISS 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151443g00004 1026 Pfam Protein kinase domain 715 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151443g00004 1026 MobiDBLite consensus disorder prediction 92 125 - -
Stsc151443g00004 1026 Coils Coil 667 687 - -
Stsc151443g00004 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Stsc151443g00004 1026 MobiDBLite consensus disorder prediction 572 600 - -
Stsc151443g00004 1026 SMART serkin_6 715 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151443g00004 1026 PANTHER DUAL SPECIFICITY PROTEIN KINASE 325 1017 - -
Stsc151443g00004 1026 FunFam Putative serine/threonine-protein kinase dyrk2 709 796 - -
Stsc151443g00004 1026 Gene3D Transferase(Phosphotransferase) domain 1 769 1017 - -
Stsc151443g00004 1026 Gene3D Phosphorylase Kinase; domain 1 709 796 - -
Stsc151443g00004 1026 FunFam Serine/threonine-protein kinase ppk15 794 1018 - -
Stsc151443g00004 1026 CDD PKc_DYRK_like 715 1017 - -
Stsc151443g00004 1026 ProSiteProfiles Protein kinase domain profile. 715 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151443g00004 1026 MobiDBLite consensus disorder prediction 145 206 - -
Stsc151443g00004 1026 MobiDBLite consensus disorder prediction 637 654 - -
Stsc151443g00004 1026 SUPERFAMILY Protein kinase-like (PK-like) 702 1019 IPR011009 -
Stsc151443g00004 1026 MobiDBLite consensus disorder prediction 392 423 - -
Stsc151443g00004 1026 MobiDBLite consensus disorder prediction 152 180 - -
Stsc151443g00004 1026 MobiDBLite consensus disorder prediction 94 125 - -
Stsc151443g00004 1026 MobiDBLite consensus disorder prediction 191 206 - -
Stsc151443g00004 1026 MobiDBLite consensus disorder prediction 636 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151443g00004 Stsc-Chr151443 8952 14700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151443g00004 713 1012 MAP Kinase Gene Family AT5G19010 30.625 1.43e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Stsc151443g00004 Pkinase 6.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151443g00004 - - pop:7454018 1308.12