Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151437g00003 | ATGGCCATTCTTCCTCCATTAACAATTGTTCTTTCCATGCTTTTCTTCCTTAATAAAGCCTCCAATGCAACAGCTGATACTATTACACAGTCTCAGTCGCTTCAAGATGGCGAAACCTTGGTTTCAGAGGGTGGATCCTTTGAATTGGGATTCTTCACTCCCGGCAGTAGTACTAATAACTCTGCAAACCGCTACATAGGAATATGGTACAAAAATGTTCCAATCAGAACCGTTGTTTGGGTTGCCAACCGCGACAACCCAATCAACGACAACTCCTCTGTTTTGTCCATTACCAAAGACGGACAACTCCTCCTTCTCAACGGAAACAACGCAGTTCTCTGGTCAACGAACGCAACGACTACCAAAATCTCGTTTACTCCCGTGGCGCAGCTCTTGGACACCGGCAACTTGGTAGTAAGGGATGAGAAAGACAAAAATCCTGAAAATTACTTCTGGCAGAGTTTTGATTATCCATCGGACACATTCCTACCAGGGATGAAGCTCGGGTGGGACTTTCGGACCGGCCTTAACCGCCGTCTAACTGCTTGGAGAAATTGGGATGATCCGTCTCCTGGAGACTACACATCTGGCATGGAACCAAACAATAATCCGGAAACCATGACATGGAAGGGATCTAAAAAGTACTATAGAATTGGACCATTTGATGGAATCGAATTTAGCGGTTCGCCATCGTTGAAATATAATCTAATTATCAACTACACATATGTGTTTAACAAGAACGAACTGTACACTGCTTATTTCATCAATGATAAGTCAGTGATTTCGAGGATCGTGTTGAACCAAACGATTTATGCTCAGCAAAGGTGGACATGGGACAAAGACTCTGAATCATGGAGATCTTCTAACTCTTTGCCTGGGGATTACTGTGATGACTACAATCTTTGCGGAGCGTTCGGGATGTGTGTCGTTAATCAGTCCCCTGTGTGTAGATGTTTAGATGGTTTTAAGGCGAAATCGCCAGAGAGTTGGAACGTGATGGATTGGAGCCAGGGGTGCGTTCGGAGCGGGAATTGGAGTTGCAGGGAGAATGGGAAAGATGGTTTTGTGAAATTTAGTAACATGAAGGTGCCGGACACAACAAGGTCATGGTTGAATGAGAGCATGACGCTTGAGGATTGCAGGGCTAAATGCTTTGAGAATTGTTCGTGTACGGCTTTTGCGAATTCAGACATCAGAGGAGAAGGTAGTGGATGTGCCATTTGGTTTGGTGATTTGTTAGATTTGAGACAGATCCAAAATGGTGGACAAGATCTCTATGTTAGACAACCAGTTTCTCAAACAGGGACAAAACATAATAACGATGATAAAATTATAGAAGACTTTGAGGTACCCTTGCTTGACTTTGCTTTAATAGTGGAAGCAACAAATGATTTCTCAAGTAATAACAAGCTTGGTGAGGGTGGTTTTGGTCCTGTGTACAAGGGAATACTACCAGATAAACAAGAGATCGCTGTTAAGAGACTTTCACGGACATCAAACCAAGGATTAAATGAGTTTATGAATGAGGTTAAATTATGCACCAAACTTCAACACCGAAATCTTGTTAAAGTGCTGGGTTGCTCTATCCGACAAGATGAGAAATTACTCGTATATGAATACATGCCTAATAGAAGCTTAGATTTCTTTCTTTTCGATCCTACACAAGCCAAACAATTAGATTGGTCTAAACGATTGTTCATTATAAATGGAATTGCTCGAGGATTACTTTATCTTCACCAAGACTCAAGATTAAGAATCATACATCGAGATCTTAAAGCAAGCAATATTTTGTTAGACAATGAAATGAATCCAAAAATTTCAGATTTTGGCTTGGCGCGATTGTGTGGAAGCAATCAAAACGAAGGAAATACGAGCAAAGTTGTTGGTACATACGGTTACATGGCACCTGAATATGCATTTGATGGAATATTTTCTATCAAGTCAGATGTATTTAGTTTTGGAATATTATTATTAGAGATAGTAAGTGGCAAGAAAAATAGTGGAATATCTCATTTTGACAACAACAACAATCTTATTGCTCATGCATGGAGGTTATGGAAAGAGGGAAATCCGATACAATTAATAGATTCTTATATAGAAGACTCGTGCATTCTATATGAAGCCTTAAGGTGCATTCATGTAGGCCTTTTATGTGTGCAGCATCGCCCTAATGAAAGGCCTAATATGGCAACCGTTATTATGATGTTGAGTAACCAGAATCCTTTGCCTGAGCCAAAAGAACCTAATTTCTTAATTGAGAAGATCTTAATTGATGGAGAGACTTATTCAACCAAAGAAAAGTTATCTACCACTAATGAGCTTACAATTTCAATATTAAGCCCTAGATAA | 2349 | 0.4014 | MAILPPLTIVLSMLFFLNKASNATADTITQSQSLQDGETLVSEGGSFELGFFTPGSSTNNSANRYIGIWYKNVPIRTVVWVANRDNPINDNSSVLSITKDGQLLLLNGNNAVLWSTNATTTKISFTPVAQLLDTGNLVVRDEKDKNPENYFWQSFDYPSDTFLPGMKLGWDFRTGLNRRLTAWRNWDDPSPGDYTSGMEPNNNPETMTWKGSKKYYRIGPFDGIEFSGSPSLKYNLIINYTYVFNKNELYTAYFINDKSVISRIVLNQTIYAQQRWTWDKDSESWRSSNSLPGDYCDDYNLCGAFGMCVVNQSPVCRCLDGFKAKSPESWNVMDWSQGCVRSGNWSCRENGKDGFVKFSNMKVPDTTRSWLNESMTLEDCRAKCFENCSCTAFANSDIRGEGSGCAIWFGDLLDLRQIQNGGQDLYVRQPVSQTGTKHNNDDKIIEDFEVPLLDFALIVEATNDFSSNNKLGEGGFGPVYKGILPDKQEIAVKRLSRTSNQGLNEFMNEVKLCTKLQHRNLVKVLGCSIRQDEKLLVYEYMPNRSLDFFLFDPTQAKQLDWSKRLFIINGIARGLLYLHQDSRLRIIHRDLKASNILLDNEMNPKISDFGLARLCGSNQNEGNTSKVVGTYGYMAPEYAFDGIFSIKSDVFSFGILLLEIVSGKKNSGISHFDNNNNLIAHAWRLWKEGNPIQLIDSYIEDSCILYEALRCIHVGLLCVQHRPNERPNMATVIMMLSNQNPLPEPKEPNFLIEKILIDGETYSTKEKLSTTNELTISILSPR | 782 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151437g00003 | 782 | PIRSF | SRK | 1 | 448 | IPR024171 | GO:0004674 | |
Stsc151437g00003 | 782 | PIRSF | SRK | 429 | 782 | IPR024171 | GO:0004674 | |
Stsc151437g00003 | 782 | Gene3D | Hepatocyte Growth Factor | 347 | 428 | - | - | |
Stsc151437g00003 | 782 | SMART | serkin_6 | 465 | 743 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc151437g00003 | 782 | Gene3D | - | 19 | 155 | IPR036426 | - | |
Stsc151437g00003 | 782 | Pfam | Protein tyrosine and serine/threonine kinase | 468 | 734 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc151437g00003 | 782 | Gene3D | Transferase(Phosphotransferase) domain 1 | 541 | 746 | - | - | |
Stsc151437g00003 | 782 | Pfam | S-locus glycoprotein domain | 216 | 325 | IPR000858 | GO:0048544 | |
Stsc151437g00003 | 782 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 21 | 155 | - | - | |
Stsc151437g00003 | 782 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 346 | 429 | - | - | |
Stsc151437g00003 | 782 | ProSiteProfiles | Protein kinase domain profile. | 465 | 750 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc151437g00003 | 782 | Pfam | PAN-like domain | 347 | 415 | IPR003609 | - | |
Stsc151437g00003 | 782 | ProSiteProfiles | EGF-like domain profile. | 292 | 328 | IPR000742 | - | |
Stsc151437g00003 | 782 | Pfam | Domain of unknown function (DUF3403) | 737 | 782 | IPR021820 | GO:0004674 | |
Stsc151437g00003 | 782 | CDD | B_lectin | 31 | 158 | IPR001480 | - | |
Stsc151437g00003 | 782 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 429 | 540 | - | - | |
Stsc151437g00003 | 782 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 586 | 598 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc151437g00003 | 782 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 11 | 724 | - | - | |
Stsc151437g00003 | 782 | SMART | blect_4 | 31 | 158 | IPR001480 | - | |
Stsc151437g00003 | 782 | SMART | ntp_6 | 350 | 429 | IPR003609 | - | |
Stsc151437g00003 | 782 | ProSiteProfiles | Bulb-type lectin domain profile. | 25 | 152 | IPR001480 | - | |
Stsc151437g00003 | 782 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 541 | 744 | - | - | |
Stsc151437g00003 | 782 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 78 | 189 | IPR036426 | - | |
Stsc151437g00003 | 782 | Pfam | D-mannose binding lectin | 77 | 184 | IPR001480 | - | |
Stsc151437g00003 | 782 | CDD | PAN_AP_plant | 346 | 428 | - | - | |
Stsc151437g00003 | 782 | CDD | STKc_IRAK | 471 | 736 | - | - | |
Stsc151437g00003 | 782 | ProSiteProfiles | PAN/Apple domain profile. | 347 | 430 | IPR003609 | - | |
Stsc151437g00003 | 782 | Gene3D | Phosphorylase Kinase; domain 1 | 429 | 540 | - | - | |
Stsc151437g00003 | 782 | SUPERFAMILY | Protein kinase-like (PK-like) | 448 | 736 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151437g00003 | Stsc-Chr151437 | 13934 | 21357 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151437g00003 | 439 | 753 | Receptor kinase-like Gene Family | AT4G23230 | 58.544 | 1.66e-127 | 392 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Stsc151437g00003 | PK_Tyr_Ser-Thr | 3.7e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151437g00003 | - | - | gmx:100786696 | 1082.78 |