Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151436g00002 ATGGCACATGGTGATGTGGCCTCTCAGCAGATCACCCAACTTGACTCCCATCCTGAGTATTCAGTTGGAGATGAATTAGAAGGTAGAACCCCTCCAATTAGCTCGATTGGGGGAGGAATTTCTGTGATAGGAGCATGCCTAAGAACAGGTGCTGTGAGAACTAGAATAGTCTCTGTTGAGGTTGGTGCTCATGATTGGAGCTACCTTTCTTGTAACAACTGCCCGAAGAAAGTGAAGGAAGTCAAGAATGGATATCAATGTGGGAGGTGCCATAGAATTCTTACTGATCCACCTGTGAGGTATCGCCTGAGTATTATAGTAGCTGATGGAACTGGGTGCTTGAATCTGGTGCTTTGGATCCAAGAGGGCAAAGTCATCATTGGCCAATCTGCTAATGACGTTAGAGCTATGCATAAGACAAAGGGTTGGAATACACAGCCGAAAATATTTGCTGAACTTCTTGAGAAGTTGTTTCTGTTCAAGGGGATGGAGCAGACTGTGTCAAATACGCTGGCTAATATGGTGTGTGGGGAAGATGATTCAGATATCAATGCTGTCTGCGCTGTTTTCTTATCCCAGGTAATGAAGTTACTGAAACCGCCTCAAAGTAATTTTGAGGAAGGAGTGGGAACTCTTGTGAAGGCTGTCAAAGGGGACTCAATTCCAAGTGCACAAGTGACTTCCATCTACACCCTAGATGTTCAGGGTTCAAGCAGCAGAACCTTCCATCGCAGTGGTGGGAAGCGGAAGTCTGATTAG 759 0.4559 MAHGDVASQQITQLDSHPEYSVGDELEGRTPPISSIGGGISVIGACLRTGAVRTRIVSVEVGAHDWSYLSCNNCPKKVKEVKNGYQCGRCHRILTDPPVRYRLSIIVADGTGCLNLVLWIQEGKVIIGQSANDVRAMHKTKGWNTQPKIFAELLEKLFLFKGMEQTVSNTLANMVCGEDDSDINAVCAVFLSQVMKLLKPPQSNFEEGVGTLVKAVKGDSIPSAQVTSIYTLDVQGSSSRTFHRSGGKRKSD 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151436g00002 252 Gene3D - 48 198 IPR012340 -
Stsc151436g00002 252 SUPERFAMILY Nucleic acid-binding proteins 53 163 IPR012340 -
Stsc151436g00002 252 CDD RPA1_DBD_C 66 161 IPR047192 -
Stsc151436g00002 252 Pfam Replication factor-A C terminal domain 64 161 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151436g00002 Stsc-Chr151436 28769 30434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151436g00002 68 142 Core DNA Replication Machinery Family AT5G08020 32.895 1.75e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151436g00002 - - ahf:112718168 150.984