Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151435g00007 ATGTCACCTTTCAATCTCACCTTTCTAGTCACAATTTTCCTCTCTCTTATCTTCTCAACCCTTGCTAAAGTTGATCCAACGTTAACAAGGCCTAAATCCCAAACACTATCATACATAGAGTCGTCTTGCAATGGCACCCTATACCGTGAACTGTGTATCCGTTCTTTATCGAAATTTGCGAGCAGAAACGACATAGAAGGTCCGCAACACTTAGCACACGTTGCCTTGTCAATTAGCCTTGTTAGGGCAATCCAAACAAAGAACTACTTGGTGGGAGTTTCCAAGGAACTCAATGCAATGAACAACATCAATAACGACAACATCAACAACAGCAACATTGACAAGAAGAAGAGAAGGCAGTACCAAACAATTCAAGATTGTGTGAATCAACTAAGTGATAGCGTTGACCAACTTAGTCAATCCATCAAGGAGCTAAGAAGGATGAACAAGAAAAGTAACATGAGTGGATCATCATCATCATCAAGAATAAATGATGATTTCTTGTTTCACTTTAACAATGTTGAGACATGGGTTAGCACAGCCTTAACAGATGCAAGTAGTTGTGTGTATGCATTCCCAGGGCATAGAATGAGTAAGAGAACAGCTTCAATTAGGGGTAAGGCCATGAATGTTGCACAAGTTACTAGCAATGCATTAGCCTTCATTCATAAGTATATGGAAGCAGCATCAAGGAACACAAAGCCTTGA 708 0.3997 MSPFNLTFLVTIFLSLIFSTLAKVDPTLTRPKSQTLSYIESSCNGTLYRELCIRSLSKFASRNDIEGPQHLAHVALSISLVRAIQTKNYLVGVSKELNAMNNINNDNINNSNIDKKKRRQYQTIQDCVNQLSDSVDQLSQSIKELRRMNKKSNMSGSSSSSRINDDFLFHFNNVETWVSTALTDASSCVYAFPGHRMSKRTASIRGKAMNVAQVTSNALAFIHKYMEAASRNTKP 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151435g00007 235 Pfam Plant invertase/pectin methylesterase inhibitor 38 220 IPR006501 GO:0004857
Stsc151435g00007 235 CDD PMEI-like_3 41 225 - -
Stsc151435g00007 235 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 225 IPR035513 -
Stsc151435g00007 235 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 225 IPR035513 -
Stsc151435g00007 235 Coils Coil 128 148 - -
Stsc151435g00007 235 NCBIfam pectinesterase inhibitor domain 8 225 IPR006501 GO:0004857
Stsc151435g00007 235 SMART PMEI_2 34 221 IPR006501 GO:0004857
Stsc151435g00007 235 FunFam Pectinesterase inhibitor 3 34 226 - -
Stsc151435g00007 235 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151435g00007 Stsc-Chr151435 38863 39631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151435g00007 4 220 Carbohydrate Esterase AT5G53370 24.670 8.66e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151435g00007 - - gmx:100807870 230.335