Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151435g00005 ATGAACAATTGGTTAGGGAAACTAGGAAACCAAGAAGCCCTTCTAGTTGATGATGATGATTCAAACCAAATTTCAAGTACTATTAGTGTTGTGGCTCTAAGAGATTGTGCTAAGCTCTATGAGGAGAGTGAGTATAGGCTTTTTTACATGATGAACTCAATGATGAATAGTAGCTATTATTATTATGACAATGATGATGCACTTACTTGGGTTAGTGCTGTGATGACAAACCACAAAACTTGTTTGGATGGAGTGAAGGAAAAAGGGTATGTTGGTGTTGATGATGATGAGGTTTTGCAAAGTGGAAACTTGACCATGTTGCTTGACAAAGCTCTTGATTTTTATGCTAAGAGAAAAGGCAAAGCAAAAGCAAAAGCAAAAGGAGCACCACAAAGACAAAGAGCATTTTCCAGATCATCATCACCAAGCAATGGTGGAATATTAGCATCATGGAATCCATCAACACACAAAGCAGAGTTCATAGTATCACAAGATGGTTCAGGAACACACAAAACAATAAGGGATGCAGTGGAAGCAATTGCTTCAAGGGGTAGCAGCCATGAAGAAAGAACAATTGTTTATGTGAAAGCAGGTGTGTATCATGAGAAAGTAGTGATTGGAAGCAAATTGCAGAATGTGATGTTTGTTGGAGATGGCATGGACAGAACCATTGTCACTGGAAGCAGAAGTGTTGTTGATGGTTCTACCACTGTTGGTTCAGCCACATTTGATGTATATGGAGATGGATTTTGGGCAAGAGACATGACATTCGAGAACACAGCAGGACCAAGAAAGCACCAAGCAGTAGCATTAAAATCAAGCTCAGACTTATCAGTTTTCTACCGATGCAGATTCAGAGCATATCAAGACACATTATTCGTCCACTCCAATCGCCAATTCTACCGAGATTGCCAGATCCTCGGAACCATAGATTTCATATTCGGAGATGCCACAGTTGTTATTCAAAACAGTGACATCTATGTTAGAAAACCAATGTTGTCCCAATCAAACTATGTCACAGCACAGGGGAGGGATGATCCAAGAAAACCAACCGGGATTTCAATAATTAACTGTAAGATTAGGCCAGCAAGTGATTTGGTTTCATCGGAGGATTCAATCAAGACATTCTTGGGGAGGCCATGGAAGAGGTATTCAAGGACTGTGGTGATGAAGAGTGATTTGGATGGGTTGATTAGTCCTAAAGGGTGGGGTGAATGGGAGGGTCAATTTGCAATTAGGACATTGTATTATGGTGAGTATATGAATTATGGAAATGGTGCTAGTGTAAGGAATAGGGTTGATTGGCCTGGGTTTCATGTATTGAGTAGTGCTAATGAAGCTTATGCTTTTAGTGTGAGTCAGTTCTTGCAAGGTGGTAGGTGGATTCCTGCTTCTGGAGTTCCATTTTCCTCTGGGATTTAA 1422 0.4044 MNNWLGKLGNQEALLVDDDDSNQISSTISVVALRDCAKLYEESEYRLFYMMNSMMNSSYYYYDNDDALTWVSAVMTNHKTCLDGVKEKGYVGVDDDEVLQSGNLTMLLDKALDFYAKRKGKAKAKAKGAPQRQRAFSRSSSPSNGGILASWNPSTHKAEFIVSQDGSGTHKTIRDAVEAIASRGSSHEERTIVYVKAGVYHEKVVIGSKLQNVMFVGDGMDRTIVTGSRSVVDGSTTVGSATFDVYGDGFWARDMTFENTAGPRKHQAVALKSSSDLSVFYRCRFRAYQDTLFVHSNRQFYRDCQILGTIDFIFGDATVVIQNSDIYVRKPMLSQSNYVTAQGRDDPRKPTGISIINCKIRPASDLVSSEDSIKTFLGRPWKRYSRTVVMKSDLDGLISPKGWGEWEGQFAIRTLYYGEYMNYGNGASVRNRVDWPGFHVLSSANEAYAFSVSQFLQGGRWIPASGVPFSSGI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151435g00005 473 Gene3D - 153 473 IPR012334 -
Stsc151435g00005 473 PANTHER PECTINESTERASE 24 463 - -
Stsc151435g00005 473 SUPERFAMILY Pectin lyase-like 155 472 IPR011050 -
Stsc151435g00005 473 FunFam Pectinesterase 153 473 - -
Stsc151435g00005 473 Pfam Plant invertase/pectin methylesterase inhibitor 26 96 IPR006501 GO:0004857
Stsc151435g00005 473 MobiDBLite consensus disorder prediction 123 148 - -
Stsc151435g00005 473 MobiDBLite consensus disorder prediction 133 148 - -
Stsc151435g00005 473 Pfam Pectinesterase 160 458 IPR000070 GO:0030599|GO:0042545
Stsc151435g00005 473 Gene3D Invertase/pectin methylesterase inhibitor family protein 15 117 IPR035513 -
Stsc151435g00005 473 ProSitePatterns Pectinesterase signature 2. 306 315 IPR033131 -
Stsc151435g00005 473 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 91 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151435g00005 Stsc-Chr151435 25334 29804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151435g00005 19 473 Carbohydrate Esterase AT3G60730 51.789 2.15e-178 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151435g00005 K01051 - gmx:100792852 585.489