Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151434g00005 ATGGCCTTATCAAGCTCACACATACAAAGGTTCCTCTTCCATGGCAGCTTCTCCTCCACTTCAAAGCATTATGATCGTCACAACCACAGGAACACCTTTGCTGCTGTCACATGCACAAGCAGGTGCTACTCTGCCATTGCCATTGATGCACCTTCATCTTTAGCTGAGGCTCCTGGTGTAAGATGGGGATCCATAGCTTTGCAAGGTATAAGGGAAGAGATGGAGGATGATATCATTGTTCGCCCTAATGGCCTTGATGGGTTCTCTTTTGCTGCTGTTTTTGATGGCCATGGAGGCTTCTCTTCTGTTGAGTTCCTCAGGGATGAGCTCTACAAGGAGTGTCTTGAAGCCTTACAAGGTGGGTTATTATTGGTTGAGAAGGATTTCAAAGCCATTAAAGAAGCATTGGAGGAGGCATTTGCCAAAGCGGACGCGAAGTTGTTAAAATGGCTTGAGATGAAGGGGGAGGAGGACGAATCAGGCGCAACAGCAACTGCAGTGTTCATAGGAGACGATACGCTGCTCATTTCACATATCGGCGACTCATCCGTGGTTCTATCTAGAGCTGGAAAAGCAGAAATGCTTACTAGTCCTCACAGACCGTACGGGAGCAACAAGGCTTCTCTTCAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGATTGTCAATGGTAGAATTTGCGGAGACATTGCTGTATCTCGTGCATTCGGGGACGTACGATACAAAACAAAGAAGAATGAGATGCTACAGAAAGGAGTTCAAGAAGGAAGATGGTCACAAAAGTTTATTTCTCGGGTACGGCTCAACAATGATTTAGTTGTTGCATTCCCTGATATTTATCAAGTAAATCTTGACTCGGACGCAGAGTTTATAGTATTAGCTTCAGATGGATTATGGGACTATATGAGCAGCTCAGATGCAGTTTCCTTTGTGAGGGAACAGTTACAAAAACATGGAAACATTCAGCTAGCCTGTGAAGCGCTTGCACAAGCAGCTATGGACCGAAGAACACAGGATAATGTCAGCATTATAATTGCTGATTTAGGTGGCTGCAGGAAGACGGATTGGCAGAATGTGCCACTGCAGCAACAAAATATGGTATTTGAGCTGGTTCAAGCCCTTGCTACCATTGCTGTTGTGTCCATTGGAATTTGGTTTTCATCTCAGCTTTCTTTGTAG 1182 0.4484 MALSSSHIQRFLFHGSFSSTSKHYDRHNHRNTFAAVTCTSRCYSAIAIDAPSSLAEAPGVRWGSIALQGIREEMEDDIIVRPNGLDGFSFAAVFDGHGGFSSVEFLRDELYKECLEALQGGLLLVEKDFKAIKEALEEAFAKADAKLLKWLEMKGEEDESGATATAVFIGDDTLLISHIGDSSVVLSRAGKAEMLTSPHRPYGSNKASLQEIKRIREAGGWIVNGRICGDIAVSRAFGDVRYKTKKNEMLQKGVQEGRWSQKFISRVRLNNDLVVAFPDIYQVNLDSDAEFIVLASDGLWDYMSSSDAVSFVREQLQKHGNIQLACEALAQAAMDRRTQDNVSIIIADLGGCRKTDWQNVPLQQQNMVFELVQALATIAVVSIGIWFSSQLSL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151434g00005 393 CDD PP2Cc 68 349 IPR001932 -
Stsc151434g00005 393 ProSitePatterns PPM-type phosphatase domain signature. 90 98 IPR000222 GO:0043169
Stsc151434g00005 393 PANTHER PROTEIN PHOSPHATASE 2C 55 347 IPR015655 GO:0004722|GO:0006470
Stsc151434g00005 393 Pfam Protein phosphatase 2C 63 342 IPR001932 -
Stsc151434g00005 393 SUPERFAMILY PP2C-like 54 351 IPR036457 -
Stsc151434g00005 393 Gene3D - 60 356 IPR036457 -
Stsc151434g00005 393 SMART PP2C_4 51 347 IPR001932 -
Stsc151434g00005 393 ProSiteProfiles PPM-type phosphatase domain profile. 61 349 IPR001932 -
Stsc151434g00005 393 FunFam Protein phosphatase 2C 57 60 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151434g00005 Stsc-Chr151434 30551 35375 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151434g00005 1 326 PP2C-type Phosphatase Gene Family AT4G27800 60.177 2.11e-142 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151434g00005 K04457 - gmx:100784071 619.002