Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151433g00002 ATGACGACGACGATACCTCAAACCATGGAGTCTCTACGCCAGAGAGCCACGCTCGTCAAGGAATCGCTCCACAAGAGCCAGATCATCACCGACAGCATGGTCTCCATTCTCGGCTCCTTCGACCACCGCCTCTCCGCCCTCGAAACCGCCATGCGTCCCACTCAGATTAAAACGCATTCAATTCGAAGCGCACATGATAACATTGACAAGACTCTTAAGGCAGCAGAGGTTTTCCTGGCGCAATTCGAGCAGACTCGAAAGGCGGAGGCTAAAATAATCCGAGGCCCTCAAGAGGATCTGGAAAACTATATAGAAGCAGTTGAACAATTGAGAACCAATTTGAAATTCTTCAACAGCAAAAAGAGTTTCAAAGGTAGTGAAGTTATCATCAACCATACCAACAACTTGCTTGCCAAAGCTATCGCAAAGCTTGAAGACGAGTTCAGACTTCTCTTAACAAATTACAGCAAACCGGTGGAACCTGACCGCCTATTTGACTGCATACCACACCGTCGACGATCCTCGACTTCTGGAAGGCAAAGTGATGCTAGCAAAGCTGATTTAGAATCTGAGAAGCAAGCAGAACCAGCTGTTTACACACTTCCTACCCTCATTCCACCCAGAGTTATTCCTTTGCTACATGATTTAGCACAACAAATGGTTGATGCTGGCCATCAACAACAACTCTTTCGACTCTATAGAGACACCCGTGCCCCTGTCGTGGAACAGAGTCTTAGGAAGTTAGGTGTAGAGAGGCTGAGTAAAGATGATGTTCAAAAAATGCAGTGGGAGGTTTTGGAGTCTAAGATTGGGAACTGGACTCATTTCATGAGGATTGCTGTTAAATTGCTGCTGACTGTGGAAAAGCAAATCTGTGATCAAATATTTGAAGGTTTTGATACTATGAGAACTCAGTGCTTTGCTGAAGTCATTGCTAGCAGTTTTGTTATGCTCCTTAGTTTCGGAGAGGCTGTTGCCAAAAGCAAGAGGTCATCTGAAAAACTATTTGTTACTCTAGACATGTACGAGACAATGAGAGAACTTCATCCTGAGATGGAGACAATTTTTGAAGGTAAAGCCTGCACGGAATTGCGCGAAGCTTCTATATCCTTGACAAAGAGACTAGGCCAGACAGCCATGGAAACCTTCTGTGACTTCGAGGAACTTATTGAAAATGATGCTACTAAAACTGCTGTGCTAGATGGAACTGTCCATCCACTAACTAGCTATGTGATCAATTATGTTAAGTTTCTCTTTGATTATCAATCAACACTGAAGCAAATTTTTCGTGAATTCGATCCCAACGACCCAGAAAGTCAGCTAGCAAACCTTACAACAAGGATTATGCAGGCTCTCCAGAATAATCTAGATGGAAAATCAAAACAATATAAAGATCCAGCATTATCCCAACTGTTTCTTATGAATAATATCCATTACATAGTGAGATCAGTGAGAAGGTCAGATGCAAAAGATATGTTGGGCGAGGACTGGGTGCAAATACATAGAAGAGTTGTGCAACAGCATGCAAATCAGTATAAGAGGATCTCATGGGCAAAGATAGCTCAGTGCCTCACAGTGCAATCACCAAATTCATCAGGCGGTGCTGACAGCACTGCTGGAATTTCAAGAAACATGATTAAAGATAGGTTCAAGAGTTTCAACTCTCAAATTGAGGAGCTTTATTGGAGACAATCTCAATGGACAGTTCCTGACAGTGAGTTGCGTGAATCTCTCAAATTGGCTATTATTGAAGTACTTTTACCTGCTTATAGATCTTTCCTCAAACGTTTTGGGGATACCTGGAATGCTTCCTTCATGTATATTCATCCTTCTCATGGATTTAAGAAATTTGAATCTCTTAGGCCCATGCTTGAGAATGGGAAAAATCCTACGAAGTACATAAGATACACAGCAGAACAAATTGAAGAAATGCTGAATGGCTTTTTCGAGAGCAAGTCATGGAATGATCAGAAGCGGTGA 1980 0.4247 MTTTIPQTMESLRQRATLVKESLHKSQIITDSMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEVFLAQFEQTRKAEAKIIRGPQEDLENYIEAVEQLRTNLKFFNSKKSFKGSEVIINHTNNLLAKAIAKLEDEFRLLLTNYSKPVEPDRLFDCIPHRRRSSTSGRQSDASKADLESEKQAEPAVYTLPTLIPPRVIPLLHDLAQQMVDAGHQQQLFRLYRDTRAPVVEQSLRKLGVERLSKDDVQKMQWEVLESKIGNWTHFMRIAVKLLLTVEKQICDQIFEGFDTMRTQCFAEVIASSFVMLLSFGEAVAKSKRSSEKLFVTLDMYETMRELHPEMETIFEGKACTELREASISLTKRLGQTAMETFCDFEELIENDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQIFREFDPNDPESQLANLTTRIMQALQNNLDGKSKQYKDPALSQLFLMNNIHYIVRSVRRSDAKDMLGEDWVQIHRRVVQQHANQYKRISWAKIAQCLTVQSPNSSGGADSTAGISRNMIKDRFKSFNSQIEELYWRQSQWTVPDSELRESLKLAIIEVLLPAYRSFLKRFGDTWNASFMYIHPSHGFKKFESLRPMLENGKNPTKYIRYTAEQIEEMLNGFFESKSWNDQKR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151433g00002 659 SUPERFAMILY Cullin repeat-like 80 650 IPR016159 -
Stsc151433g00002 659 Gene3D Exocyst complex component Exo70 76 659 - -
Stsc151433g00002 659 Pfam Exo70 exocyst complex subunit 272 646 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc151433g00002 659 Coils Coil 100 120 - -
Stsc151433g00002 659 MobiDBLite consensus disorder prediction 170 192 - -
Stsc151433g00002 659 PANTHER EXOCYST COMPLEX PROTEIN EXO70 59 650 IPR004140 GO:0000145|GO:0006887
Stsc151433g00002 659 MobiDBLite consensus disorder prediction 170 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151433g00002 Stsc-Chr151433 11540 15140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151433g00002 5 659 EXO70 exocyst subunit family AT5G52340 67.634 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151433g00002 K07195 - gmx:100779774 957.207