Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151430g00001 ATGGAATGTAATAAAGATGATGCCATAAAGGCTAAAGAGCTTGCTGAGAAGACTCTTCTTCAGAGGGACATCAGCAGTGCAAAGATATTTTCAACGAAAGCTCAAGAATTGTATCCTAATCTTGATGGCCTTCCTCAGTTGCTGGCCACTATTGAGGTGTATGCTTCGGCCGAAAAAAAGGTTAACGGTGAAATTGATTGGTACAAGGTCCTTGGTGTTGAACCCACGGCTGATGACCAAACAATTCGAAAACATTACAGGAAACTGGCTCTGATTCTGCACCCTGATAAAAATAAATCGGCAGGGGCAGATGAGGCATTTAATCTTATCACACAAGCATGGAGTTGTTTGTCTGATAATGCCAAGAGAGTCACGTTTGACCAAAAGCGCAACTTCTCCGGTATATATTCTGGGAAACCTTCTGTACCACCTCATCAGAATGGTTTCTTTAGTAACTTCAATTCTTCTATCTGGAAGAATAAGCATCAAGGAACTTCTACACATCCAAGTCAAACTACAAGGCCTCCTTTCTCGATGAAGCTGACATTTTGGACCATGTGCTTGTCCTGCAGGACAAAGTTTGAGTACAGTGTTCGATATATCAACGGCACACTTACGTGCGTCAAGTGCAAGAAGCCCTTTGTAGCTTCCAAGGCGTTGCCCCCGCTTGTATATAGAAATGCTTCATCTACTTCAAGCATTTCTCAGATGAAGCAAAATAACCTTACCAGGATGGGAGCAAACAATCATGTTTTGGGAAAGGTACCAATTCCTGCTGTCAACCCATCATTTGGGTCAAGTCCTTTCTTCATGCCTGGTGGCAATTCCAGAATGCCGTCATTTTCTGCTGCTGCTGAAGCTCCTGTTGTTTTCAAAGTGCCATCTGATACTTTGAAGAGGGCACGTGAAGCTTCAACGCCCGAAAATGGCCTTGCTGCTGAGAAAACTAGTGCTGCAGGTTCAGCATCTCATTCCTCTTCATTTGGTTCAAATTCTTCTCTGAAAGGAGATGCGTCAAGGTCAAGGAAAAGAATCTGCAAAAGTGAAGTCAAAGTAAACAGTGATAGGACATGTACACAAAATGGGGTAGCTTCTCAACACGAAGGAGTAAGCTTGGCAAATGAATCCAGGTCCGAAAAGAATAATTCTGAACCTGGAAGGATGAGTGCTACTGATAACTACAAGCGTAATGTTTTTTGGGATATACCCCAACAGAAAATGAAGAAGATTCTAATGGAGAAGGCGAGAAATGAAATTCAGAAAAAGCTTGAAGAATGGAATTTTGCTTCTAAATCAACAAATTCGGAAAAGTCAAAGAATACTGCTGTAGAGATCACAGCGAAGGACAAGAAAAAGGCGCTAGATGGCATGGAGAAGGACAAGAAAAAGGTTACGGATAGTGTAAAATCTGACATGAAAAATGCTATTGATGGTGCAAAACGTGGTGCACAAGAAATTGTTGATGCTGGTAACATTGGCAAGAAGCATATTCCTCCTGCTGATTCAGTTGAGCCTGATTTTACTGTCTTGATGAGTGTTCCAGACCCGGACTTCCATGATTTCGATGGGGACCGTATTGAAAATGCTTTTGGTGCAAACCAGGTGTGGGCTGTTTATGATGAGGATGATGGCATGCCGCGCTACTATGCTTTGATTCATGATGTGATCTCAAAGAAACCATTCAGCATGAGAATTAGTTGGCTTAACTCGAAGACCAACGATGAATTGGCTCCAATAAGGTGGGTTAGTGCTGGCTTTCCCAAGACCTCTGGGGATTTCAGAATAAGCAAGCGTGTGGTTTATAACAGTCTTAACACCTTTTCGCACAAGGTTCAATGGAAAAAAGGTGCAAGAGGGATTGTGCATATATATCCCAAGAAGGGGGATGTTTGGGCCCTATACCGGAACTGGTCTGCTGACTGGAGTGAATTTACCAAAGACGAAGTCATTCATAAGTATGACATGGTGGAAGTGCTGGAAGACTACACTGAGGAGCGAGGTGTGAATGTTGCTCCACTTGTTAAAGTTCTGGGCTTCAAGACAGTGTTTCGCCAGAACGAGGATCCAAGAAGAATAAGAAACATTCCAAAGGCAGAGATGTTTCGTTTCTCGCACCAAGTACCTACATACTTGCTCACTGGTCAAGAAGGCCATAATGCTCCTAAAGGCTGCTTGGAGCTTGATCCTGCAGCTACACCTATGGAACTTCTTCAAGTATTCACAGAAATACCAGAGCAAGAACCAGTACCAGTACCGATCAAGAGGAGTCGAAAAAGTAAGCAAGAAGATTCTGTTAAGGAGATTCCAAGAAAGGCAGTGGCTGAAGCAATTGGAAGGAAAGATGGTAAGCCTGAGATTTTGTATGTATATAGGAGAAGACATCTAAGGGAAAAGAGAGCAATGTAA 2406 0.4277 MECNKDDAIKAKELAEKTLLQRDISSAKIFSTKAQELYPNLDGLPQLLATIEVYASAEKKVNGEIDWYKVLGVEPTADDQTIRKHYRKLALILHPDKNKSAGADEAFNLITQAWSCLSDNAKRVTFDQKRNFSGIYSGKPSVPPHQNGFFSNFNSSIWKNKHQGTSTHPSQTTRPPFSMKLTFWTMCLSCRTKFEYSVRYINGTLTCVKCKKPFVASKALPPLVYRNASSTSSISQMKQNNLTRMGANNHVLGKVPIPAVNPSFGSSPFFMPGGNSRMPSFSAAAEAPVVFKVPSDTLKRAREASTPENGLAAEKTSAAGSASHSSSFGSNSSLKGDASRSRKRICKSEVKVNSDRTCTQNGVASQHEGVSLANESRSEKNNSEPGRMSATDNYKRNVFWDIPQQKMKKILMEKARNEIQKKLEEWNFASKSTNSEKSKNTAVEITAKDKKKALDGMEKDKKKVTDSVKSDMKNAIDGAKRGAQEIVDAGNIGKKHIPPADSVEPDFTVLMSVPDPDFHDFDGDRIENAFGANQVWAVYDEDDGMPRYYALIHDVISKKPFSMRISWLNSKTNDELAPIRWVSAGFPKTSGDFRISKRVVYNSLNTFSHKVQWKKGARGIVHIYPKKGDVWALYRNWSADWSEFTKDEVIHKYDMVEVLEDYTEERGVNVAPLVKVLGFKTVFRQNEDPRRIRNIPKAEMFRFSHQVPTYLLTGQEGHNAPKGCLELDPAATPMELLQVFTEIPEQEPVPVPIKRSRKSKQEDSVKEIPRKAVAEAIGRKDGKPEILYVYRRRHLREKRAM 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151430g00001 801 Pfam DnaJ domain 66 127 IPR001623 -
Stsc151430g00001 801 MobiDBLite consensus disorder prediction 300 390 - -
Stsc151430g00001 801 PRINTS DnaJ domain signature 68 86 IPR001623 -
Stsc151430g00001 801 PRINTS DnaJ domain signature 86 101 IPR001623 -
Stsc151430g00001 801 PRINTS DnaJ domain signature 102 122 IPR001623 -
Stsc151430g00001 801 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Stsc151430g00001 801 SUPERFAMILY Chaperone J-domain 63 153 IPR036869 -
Stsc151430g00001 801 Gene3D DnaJ domain 64 171 IPR036869 -
Stsc151430g00001 801 MobiDBLite consensus disorder prediction 337 351 - -
Stsc151430g00001 801 Pfam Domain of unknown function (DUF3444) 511 716 IPR024593 -
Stsc151430g00001 801 SMART dnaj_3 65 122 IPR001623 -
Stsc151430g00001 801 MobiDBLite consensus disorder prediction 352 390 - -
Stsc151430g00001 801 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Stsc151430g00001 801 CDD DnaJ 66 119 IPR001623 -
Stsc151430g00001 801 MobiDBLite consensus disorder prediction 310 336 - -
Stsc151430g00001 801 PANTHER BNAC03G44070D PROTEIN 1 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151430g00001 Stsc-Chr151430 31836 34241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151430g00001 4 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.751 7.55e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151430g00001 - - ahf:112772645 1261.9