Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151427g00005 ATGGAGACTTTTGAGAAAGAAATGAATGATATGAGGGAGTATTATGGGAGTGGAGACACAAAGAAAGTGTCATGGAGAGAGTCACAACTCAAAGGGTTGCGTCGTTTCCTTGTTGAAAAAGAACATGATATTCTCAAGGCCTTAATGCTTGACTTAGGGAAGCATCAAATTGAAGCTTTTAGAGATGAGATAGGAACTTTGATTAAGTCCTTGAATTTGGCATTGAGTGACTTGAAATATTGGATTTCAGGCAAAAAGGCTAAATTGCCACAAATAGCAGTGCTTTCAAGTGCAGAAATTGTTCCTGAGCCTCTGGGCCTAGTCCTCATTATTTCATCTTGGAATTTCCCCTTTGGTTTATCCTTGGAGCCACTGATAGGAGCAGTAGCAGCTGGAAACTCAGTGGTTCTAAAGCCTTCAGAGTTGTCACCAGCATGTTCTTCCATACTTGCCATTGGACTTTCCAATTACTTGGACAACAAAGCCATTAAGGTTGTACAAGGTGGACCAAATGAGTCTCAGCATCTACTCCAGCAAAAATGGGACAAGATCTTCTTCACAGGAAGTGCACGTGTTGGGAGGATTGTGATGTCTGCAGCAGCAAAGCATTTGACTCCTGTGACTTTGGAGTTGGGTGGAAAATGTCCTGCAGTTGTTGATTCACTTTCATTATCTTCCTGGGACTTGGAGGTAACTGTGAAGAGGATTCTGGTAGGGAAATATGGGGCATGTGGTGGTCAAGCTTGCATAGCAATTGACTATGTCTTGGTGGAAAATCAATACTATTCAAAATTGGTAGAATTGATGAAACCATGGATCAAGAAAATGTTTGGGGAGAACCCAAAAGACTCCAACACCATTGTCAGGATTGTTAATAAACAACACTTGTCTAGATTGAAGAATCTTTTGGCTGATCCAAAGGTCAAGAAATCTGTGGTTTATGGAGGCTCTGTAGACGAAAGAAACTTATTTATTGAGCCAACAATCTTGTTGAATCCCCCACTTGAATCAGCAATCATGACAGAAGAAATTTTCGGCCCCTTGCTTCCAATTATTACTGTGGACAAAATTGAAGATAGTATTAAATTCATAAGTTCTAGGCCTAAGCCTCTTGCACTTTATGTCTTTTCCAAGGATAAGACACTGCAGAATAGAATGATATCTGAAACATCTTCTGGCAGTTTGACTTTCAATGATGCAATTCTACAATATGCAGCGGATGCTCTACCATTTGGTGGAGTAGGAGAAAGTGGATTTGGAATGTACCATGGGAAGTTCTCTTTTGACACATTCAGCCACCAAAAGCCAGTAGTTAGAAGAAGCTTCTTAACTGATTTCTGGTACAGGTTTCCACCATGGACACTGAATAAGTTTCAGCTTCTTGAGGTCTCTTACAACTATGATTATCTGGGATTACTCCTTGTCCTGCTTGGCCTAAAGTCACCCTCAAAACACAGATCATATTTCATCAACCCCTGA 1479 0.4064 METFEKEMNDMREYYGSGDTKKVSWRESQLKGLRRFLVEKEHDILKALMLDLGKHQIEAFRDEIGTLIKSLNLALSDLKYWISGKKAKLPQIAVLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNSVVLKPSELSPACSSILAIGLSNYLDNKAIKVVQGGPNESQHLLQQKWDKIFFTGSARVGRIVMSAAAKHLTPVTLELGGKCPAVVDSLSLSSWDLEVTVKRILVGKYGACGGQACIAIDYVLVENQYYSKLVELMKPWIKKMFGENPKDSNTIVRIVNKQHLSRLKNLLADPKVKKSVVYGGSVDERNLFIEPTILLNPPLESAIMTEEIFGPLLPIITVDKIEDSIKFISSRPKPLALYVFSKDKTLQNRMISETSSGSLTFNDAILQYAADALPFGGVGESGFGMYHGKFSFDTFSHQKPVVRRSFLTDFWYRFPPWTLNKFQLLEVSYNYDYLGLLLVLLGLKSPSKHRSYFINP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151427g00005 492 FunFam Aldehyde dehydrogenase 213 417 - -
Stsc151427g00005 492 FunFam Aldehyde dehydrogenase 12 216 - -
Stsc151427g00005 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 435 IPR016162 GO:0016491
Stsc151427g00005 492 Pfam Aldehyde dehydrogenase family 21 435 IPR015590 GO:0016491
Stsc151427g00005 492 PANTHER ALDEHYDE DEHYDROGENASE 2 472 IPR012394 GO:0006081
Stsc151427g00005 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 417 IPR016163 GO:0016620
Stsc151427g00005 492 PIRSF ALDH 1 473 IPR012394 GO:0006081
Stsc151427g00005 492 SUPERFAMILY ALDH-like 12 454 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151427g00005 Stsc-Chr151427 26047 28427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151427g00005 2 480 Aldehyde Dehydrogenase Gene Family AT4G36250 53.445 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151427g00005 K00128 - gmx:100817701 771.926