Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151426g00002 ATGGGAGAAGACTGTGGAACCTGGTTACCACATATGCAATTTGGTCAGCAATCACCCAATTTGAGTCTCTTCAGTTTTCCCTCTAATGCGTGGAACCAAAATGGTATTTCTTCCACTGCTGTGAACTCTGGCATCAATTTCATATCAAGGAATGAAACAATGCCAGCTTATGGGTTGCCTTCAATGCCGAATCTGCCATTAGGACATTCTAATGAACCCCATCGTTGGTTTTATTGTTTGCCTCGCTCTCGACAGGAATTAACTCGTGCTCCAAACTATGCTGCTGAGGAAAAGCTCCTTGCTGACTGTGTAAAAGGTTTGAGGGGCAAATTTGCTCCTTATGGTGATTCAGGTTCCCCTCAGAAGCAATTCCTTGTTATTGATCAGAGGGTTGATCAGACAACTGTTGTTTATGGTTCTAAGTTTGGGAGTCCCAATGAGTGCCTTCCTTCTTGGCATTCAAAATTGCATGGCACAAACTATTTGAACGGGGAATTCCCTTTGGAAACAGATTTGACTCATCCGAATGGGCCAATTGTGGCTGATAAAGTGAATGAGAATCTGGGAACTGGTGTTGAAAGCGAGATGCATGAAGACACGGAAGAAATTAATGCATTGCTCTACTCGGACAGTGATGGTTATTCTACAGGGAATGAGGATGATGATGATGATGAAGTTACCAGCACAGGACATTCTCCAAGTACAATGACCACTCATGATAACCCAGAAAAAATTAGAGTAATTGAAGAAGTTGCGAGTTCCATTGGGAGAACGAAGAAGAGGAAGCTATCAGATGGTTATCATGATGATTTACAATTCATTGGTACTGCCAATTCTCTGAATTTGAAGAACAAATCCTTCGCCATGGAACAGGATGATGCCGAATCGAGATGTTCTAACTGCTACAATGGGAGATCAGAAGAAATGGAATCCTTGTCAGCTAACAAGAAGATGAGAAAGGAAAAAATACGAGAACTTTTGAATGTTCTTCAGAGCATGATTCCTGATGGGCCGGACAAGGTCAAGGACAAGGACCCAGCTATGCTTTTGGATGATGCCATACGCTGCTTGAAATACATGAAAGTCAAGGCTAAAGAGCTCGGACTCAAGTGA 1113 0.425 MGEDCGTWLPHMQFGQQSPNLSLFSFPSNAWNQNGISSTAVNSGINFISRNETMPAYGLPSMPNLPLGHSNEPHRWFYCLPRSRQELTRAPNYAAEEKLLADCVKGLRGKFAPYGDSGSPQKQFLVIDQRVDQTTVVYGSKFGSPNECLPSWHSKLHGTNYLNGEFPLETDLTHPNGPIVADKVNENLGTGVESEMHEDTEEINALLYSDSDGYSTGNEDDDDDEVTSTGHSPSTMTTHDNPEKIRVIEEVASSIGRTKKRKLSDGYHDDLQFIGTANSLNLKNKSFAMEQDDAESRCSNCYNGRSEEMESLSANKKMRKEKIRELLNVLQSMIPDGPDKVKDKDPAMLLDDAIRCLKYMKVKAKELGLK 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151426g00002 370 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 307 360 IPR011598 GO:0046983
Stsc151426g00002 370 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 311 366 IPR036638 GO:0046983
Stsc151426g00002 370 PANTHER TRANSCRIPTION FACTOR BHLH145 8 370 IPR037546 -
Stsc151426g00002 370 MobiDBLite consensus disorder prediction 209 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151426g00002 Stsc-Chr151426 29613 31935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151426g00002 121 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 33.466 8.36e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151426g00002 - - pvu:PHAVU_009G038200g 398.667