Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151425g00008 ATGGTGCCTGAGAGAGCTAAGCTACACTTAGCTTTAACCTTCCTACAATTTTGTCATGCTGGACATCATATAATGTTGAGAATTGCTCTCAATATGGGCATGAGCAAGCTAATCTTCCCAGTATATAGAAACGTTACTGCCCTTATTCTTCTGGCTCCTCTTGCTTATTTTTCAGAGAAGAAAGACAGACCACTATTAACCGGTTATTTTGTGATGCAATTTTTCCTGCTTGGATTAGTTGGAATAACAATAAAAGAAGGATGTTACCTAGTTGGTCTAGATAACACATCGCCTACGTTTGCATCTGCTATGCAAAACTCAGTTCCAGCCTTGACTTTTCTGATGGCTGCAATATTCAGGCAAGTTGTTGGAGTAATTGCTTCTGTTGGAGGAGCATCAATCATCACTCTTTACAAGGGACCTACAATCTATGCTCCATATTCAACATTGAATGATAAACAATCATTGTCTTTGTTGGGGGATGCAGCAGGAAAGAACTGGAACTTGGGTTGCATCTGTCTCTTTGGTCACTGCTTATGCTGGTCTGCTTGGATTGTAATGCAAGCATCTGTTCTCAAAAAGTACCCTGCCCCACTCTCAGTTTCTGCCTTTACTTGCTTCTTTGGCATCCTGCAATTTGTAACGATCGCAGCATTTTTCGAGAGAGATTACAAGGCCTGGCAATTCAATTCCAGTAGCGAGATTTTTAGTGTTTTGTATGCGGGACTGGTGACTTCAGGGCTAGCAGCAGCAATACAGATATGGGCTATTGCTAAGGCCGGGCCAGTGTTTGCTTCAATTTATCTACCTTTACAGACATTAATGGTAGCCTTGATGGCGTCCATTCTTTTAGGGGAAGAATTCTTCTTGGGAGGGATTATTGGAGCTTTATTGATTATAACAGGCTTATACCTTGTTGTGTGGGGAAAAAGTGAAGAAACCAAATATGCCAAAGAGGTCATAGCCCCTATGGAGTCCAAGAATCATGGTGAAGGAAATTGTGACAATGCTTCCATCATCCAGCCTTTGATCCTTACCCAAAACTCTTAG 1050 0.4162 MVPERAKLHLALTFLQFCHAGHHIMLRIALNMGMSKLIFPVYRNVTALILLAPLAYFSEKKDRPLLTGYFVMQFFLLGLVGITIKEGCYLVGLDNTSPTFASAMQNSVPALTFLMAAIFRQVVGVIASVGGASIITLYKGPTIYAPYSTLNDKQSLSLLGDAAGKNWNLGCICLFGHCLCWSAWIVMQASVLKKYPAPLSVSAFTCFFGILQFVTIAAFFERDYKAWQFNSSSEIFSVLYAGLVTSGLAAAIQIWAIAKAGPVFASIYLPLQTLMVALMASILLGEEFFLGGIIGALLIITGLYLVVWGKSEETKYAKEVIAPMESKNHGEGNCDNASIIQPLILTQNS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151425g00008 349 PANTHER WAT1-RELATED PROTEIN 10 319 IPR030184 GO:0016020|GO:0022857
Stsc151425g00008 349 Pfam EamA-like transporter family 17 135 IPR000620 GO:0016020
Stsc151425g00008 349 Pfam EamA-like transporter family 169 307 IPR000620 GO:0016020
Stsc151425g00008 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 139 - -
Stsc151425g00008 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 207 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151425g00008 Stsc-Chr151425 26680 28691 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151425g00008 2 344 Nodulin-like Gene Family AT1G75500 57.724 4.98e-146 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151425g00008 - - ccaj:109801260 511.146