Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151424g00007 ATGGCACAGCCACAGCCACAGCACCATCACCACACCATTAACAACAACAATGGCGGTGGCAGCACCACTCAACAACAACACCATGTCCTCCATGACTTTCTCGGCATGAAGCCTAACAACGATATAAGGCTCTCCACTGAGCTCTCACCTTCCTCTTCCTCCGCCGCTGCACGCGGCCCCTTCTCCTCCTCCGCCGCCTCTGAAATCGCTTCCGAAAAACAGGTAGGGAATCATCTTGAAGGGGTTCCATACTATGGTCCACGGAGTGATTTCTCTGGCACCGAGATAAACAACAGATTAGTGGGAAACAAGAGAAGCAATTCTGATTCTACTTTCATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGACTCCTTTCAAAACTCTCATTTGATGAAGGTCCTTCGCAGTGCGTCGGGAGGAGAGAAGCTTAGAAGGCCAAATGATGATGAAGTGTTGCTTGGTATGCAGTCGCTGAAGCCAATGTCTGCTTCTCTATTTCAGCCTCCAATAAGCTCCAANNNNNNNNNNCTTGATGCCAATAAATGGGAGCGATCTTTACTTATGAATGTTGGCCCTTCCATGCAGCATCCCCCGCGTGGGGGTCAATTGACGCCGTTTGTACACCAAATAGCCTCAAACAAAATGAGGGATGCCAATGCCGGTCCTTCATTTATTTCTCAGTCAGCTGCTGATGAAGGATCTAGAACAGGGATTAAGGGTCCTGGGATTTTAAGTTCCATAAGCCCAACCCCTTTGGCCATTGAGAAATCATTATCTGCGGGGTTTCTTGGTGGAAGCAGGACAAAGACTGTAAGTAATGTAGTAGACCCCGAATCATCGACTCTTCCAAGTCAACATGGCCTAAAACCTTCCAGCCGCCAGATGACTATATTTTACGGGGGTCAAGCTCATGTTTTCGATGATGTCCACCCTCACAAGGCAGATGTTATAATGTCTTTAGCTGGGTCAAATGGTGGATCATGGTCAACATCATTCTCGCCGAAATCTTCTGCAAAGCTGGCTAATGATAGTAACTTGCATAGTGGAGAGAACGACACGAGTATCCCGCATGATCTTCACGGGAGGTTACTTATTACTGGAAGTTCTAGCCATGCCATTGTGCCTGGTGATCGACTATCTACTCCGGCAGGGAAGCATTGTATCTAA 1173 0.4757 MAQPQPQHHHHTINNNNGGGSTTQQQHHVLHDFLGMKPNNDIRLSTELSPSSSSAAARGPFSSSAASEIASEKQVGNHLEGVPYYGPRSDFSGTEINNRLVGNKRSNSDSTFMGSSRDAFQMVPDSFQNSHLMKVLRSASGGEKLRRPNDDEVLLGMQSLKPMSASLFQPPISSXXXXLDANKWERSLLMNVGPSMQHPPRGGQLTPFVHQIASNKMRDANAGPSFISQSAADEGSRTGIKGPGILSSISPTPLAIEKSLSAGFLGGSRTKTVSNVVDPESSTLPSQHGLKPSSRQMTIFYGGQAHVFDDVHPHKADVIMSLAGSNGGSWSTSFSPKSSAKLANDSNLHSGENDTSIPHDLHGRLLITGSSSHAIVPGDRLSTPAGKHCI 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151424g00007 390 MobiDBLite consensus disorder prediction 79 116 - -
Stsc151424g00007 390 MobiDBLite consensus disorder prediction 91 116 - -
Stsc151424g00007 390 Pfam tify domain 292 324 IPR010399 -
Stsc151424g00007 390 SMART tify_2 290 325 IPR010399 -
Stsc151424g00007 390 MobiDBLite consensus disorder prediction 1 29 - -
Stsc151424g00007 390 MobiDBLite consensus disorder prediction 221 235 - -
Stsc151424g00007 390 MobiDBLite consensus disorder prediction 42 60 - -
Stsc151424g00007 390 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 91 346 IPR040390 -
Stsc151424g00007 390 MobiDBLite consensus disorder prediction 333 354 - -
Stsc151424g00007 390 ProSiteProfiles Tify domain profile. 290 325 IPR010399 -
Stsc151424g00007 390 MobiDBLite consensus disorder prediction 333 361 - -
Stsc151424g00007 390 MobiDBLite consensus disorder prediction 1 60 - -
Stsc151424g00007 390 MobiDBLite consensus disorder prediction 220 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151424g00007 Stsc-Chr151424 20695 27900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151424g00007 13 323 Tify Gene Family AT4G32570 35.988 2.09e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Stsc151424g00007 tify 4.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151424g00007 - - ahf:112707837 650.973