Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151424g00006 ATGGCACAGCCACAGCCACAGCACCATCACCACACCATTAACAACAACAATGGCGGTGGCAGCACCACTCAACAACAACACCATGTCCTCCATGACTTTCTCGGCATGAAGCCTAACAACGATATAAGGCTCTCCACTGAGCTCTCACCTTCCTCTTCCTCCGCCGCTGCACGCGGCCCCTTCTCCTCCTCCGCCGCCTCTGAAATCGCTTCCGAAAAACAGGTAGGGAATCATCTTGAAGGGGTTCCATACTATGGTCCACGGAGTGATTTCTCTGGCACCGAGATAAACAACAGATTAGTGGGAAACAAGAGAAGCAATTCTGATTCTACTTTCATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGACTCCTTTCAAAACTCTCATTTGATGAAGGTCCTTCGCAGTGCGTCGGGAGGAGAGAAGCTTAGAAGGCCAAATGATGATGAAGTGTTGCTTGGTATGCAGTCGCTGAAGCCAATGTCTGCTTCTCTATTTCAGCCTCCAATAAGCTCCAANNNNNNNNNNCTTGATGCCAATAAATGGGAGCGATCTTTACTTATGAATGTTGGCCCTTCCATGCAGCATCCCCCGCGTGGGGGTCAATTGACGCCGTTTGTACACCAAATAGCCTCAAACAAAATGAGGGATGCCAATGCCGGTCCTTCATTTATTTCTCAGTCAGCTGCTGATGAAGGATCTAGAACAGGGATTAAGGGTCCTGGGATTTTAAGTTCCATAAGCCCAACCCCTTTGGCCATTGAGAAATCATTATCTGCGGGGTTTCTTGGTGGAAGCAGGACAAAGACTGTAAGTAATGTAGTAGACCCCGAATCATCGACTCTTCCAAGTCAACATGGCCTAAAACCTTCCAGCCGCCAGATGACTATATTTTACGGGGGTCAAGCTCATGTTTTCGATGATGTCCACCCTCACAAGGCAGATGTTATAATGTCTTTAGCTGGGTCAAATGGTGGATCATGGTCAACATCATTCTCGCCGAAATCTTCTGCAAAGCTGGCTAATGATAGTAACTTGCATAGTGGAGAGAACGACACGAGTATCCCGCATGATCTTCACGGGAGGTTACTTATTACTGGAAGTTCTAGCCATGCCATTGTGCCTGGTGATCGACTATCTACTCCGGCAGTGGCACACCAGGGAAGCATTGTATCTAAACATACAAGAAATCCTGTTCAAGCATCTGACCCCAGATCTGAAGACAAAAAAAGAGCACTATGA 1248 0.4728 MAQPQPQHHHHTINNNNGGGSTTQQQHHVLHDFLGMKPNNDIRLSTELSPSSSSAAARGPFSSSAASEIASEKQVGNHLEGVPYYGPRSDFSGTEINNRLVGNKRSNSDSTFMGSSRDAFQMVPDSFQNSHLMKVLRSASGGEKLRRPNDDEVLLGMQSLKPMSASLFQPPISSXXXXLDANKWERSLLMNVGPSMQHPPRGGQLTPFVHQIASNKMRDANAGPSFISQSAADEGSRTGIKGPGILSSISPTPLAIEKSLSAGFLGGSRTKTVSNVVDPESSTLPSQHGLKPSSRQMTIFYGGQAHVFDDVHPHKADVIMSLAGSNGGSWSTSFSPKSSAKLANDSNLHSGENDTSIPHDLHGRLLITGSSSHAIVPGDRLSTPAVAHQGSIVSKHTRNPVQASDPRSEDKKRAL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151424g00006 415 MobiDBLite consensus disorder prediction 79 116 - -
Stsc151424g00006 415 MobiDBLite consensus disorder prediction 387 401 - -
Stsc151424g00006 415 MobiDBLite consensus disorder prediction 91 116 - -
Stsc151424g00006 415 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 91 355 IPR040390 -
Stsc151424g00006 415 SMART tify_2 290 325 IPR010399 -
Stsc151424g00006 415 MobiDBLite consensus disorder prediction 1 29 - -
Stsc151424g00006 415 Pfam tify domain 292 324 IPR010399 -
Stsc151424g00006 415 MobiDBLite consensus disorder prediction 221 235 - -
Stsc151424g00006 415 MobiDBLite consensus disorder prediction 42 60 - -
Stsc151424g00006 415 MobiDBLite consensus disorder prediction 330 354 - -
Stsc151424g00006 415 ProSiteProfiles Tify domain profile. 290 325 IPR010399 -
Stsc151424g00006 415 MobiDBLite consensus disorder prediction 374 415 - -
Stsc151424g00006 415 MobiDBLite consensus disorder prediction 1 60 - -
Stsc151424g00006 415 MobiDBLite consensus disorder prediction 220 244 - -
Stsc151424g00006 415 MobiDBLite consensus disorder prediction 330 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151424g00006 Stsc-Chr151424 20695 27900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151424g00006 13 323 Tify Gene Family AT4G32570 36.471 3.20e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Stsc151424g00006 tify 4.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151424g00006 - - ahf:112707837 698.738