Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151423g00010 ATGGGGTGGCCACTTTTTGGAGAAACTACTGAGTTTCTTAAACAAGGTCCTAACTTCATGAAAAACAAAAGAGCAAGGTATGGCAGTTTTTTCAAAACACACATATTAGGGAGCCCTACAATTGTTTCAATGGATGCAGAGATGAACAGATACATTCTAATGAATGAATCAAAAGGGCTTGTTCCAGGATACCCTAAATCCATGGTAGACATCTTGGGAGAACTCAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACTTGAGAGGTGCCTTGCTTTCCATCATTAGCCCCACCATGATCATAGATCAGCTTTTGCCTAAAATTGATCAGCTCGTGAGATCCTACCTTAGCAATTGGGACAATCAAGTCATCGACATCCAACAGAAAACCAAAGAGATGGCCTTCCTTTCATCACTCCGCCAGGTCGTAAGCAAAGAATCAATCAGAATAAGAGATAGAATCACACCGGAGTTCTTCAAACTAGTCCTAGGAACCCTTTCTCTGCCTATTCCCCTTCCGGGGACGAATTATAGTCGCGCATTTCAGGCAAGGAAAGCCATTGTAAGCATAATAAGAGAAGTAATAGAAGAAAGGAGAAAATCCCAAGAAATGCACAAAGACATGCTTGCTGGATTGATGGGAAATGATGAGAGTAGATACAAACTAAGTGATGAAGAAATCATTGATCTAGTGATCACAGTTATGTTTTCTAGTCATGAAACTGTTTCAACTACGTCAATGATGGCACTCAAGTATCTTCAAGACCACCCCAACGCACTTCAACAATTCAGAGATGAGCATTTGGCCATTAGACAAAGGAAAAAACCAGATGAACCAATTGATTTCAACGATATCAAGTCAATGAAGTTTACTCGCGCGGTGATTTTTGAGACCCTTAGATTGGCCACATTAATTAGTGGGCTCTTTAGAAAAACCACTGAAGAAATGGAACTAAATGGTTATTTGATTCCCAAAGGGTGGAAGATATTTGTGTACTTAAGAGAGATAAATTATGAGCCTTCTCTATATCCTGAACCACTAAAGTTCAACCCATGGAGATGGCTGGAGAAGAACCTTGAATCAAATAAGCAGTTCCTGATATTTGGAGGAGGTGCCAAATTTTGTCCAGGGAAAGAGTTGGGGATAATAGAAATTTCAACTTTCTTGCACTATTTTGTAACAAGATACAGGTGGGAAGAAGTAGGAGGAGATAAACTACTGTTATTTCCAACAGTTCAGGCACCTAATGGACTGCACATAAGGGTGTCATGCTACTAA 1281 0.402 MGWPLFGETTEFLKQGPNFMKNKRARYGSFFKTHILGSPTIVSMDAEMNRYILMNESKGLVPGYPKSMVDILGELNIAAVHGSTHKYLRGALLSIISPTMIIDQLLPKIDQLVRSYLSNWDNQVIDIQQKTKEMAFLSSLRQVVSKESIRIRDRITPEFFKLVLGTLSLPIPLPGTNYSRAFQARKAIVSIIREVIEERRKSQEMHKDMLAGLMGNDESRYKLSDEEIIDLVITVMFSSHETVSTTSMMALKYLQDHPNALQQFRDEHLAIRQRKKPDEPIDFNDIKSMKFTRAVIFETLRLATLISGLFRKTTEEMELNGYLIPKGWKIFVYLREINYEPSLYPEPLKFNPWRWLEKNLESNKQFLIFGGGAKFCPGKELGIIEISTFLHYFVTRYRWEEVGGDKLLLFPTVQAPNGLHIRVSCY 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151423g00010 426 CDD CYP90-like 24 424 - -
Stsc151423g00010 426 Pfam Cytochrome P450 3 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151423g00010 426 PRINTS E-class P450 group I signature 293 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151423g00010 426 PRINTS E-class P450 group I signature 227 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151423g00010 426 PRINTS E-class P450 group I signature 376 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151423g00010 426 PRINTS E-class P450 group I signature 366 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151423g00010 426 PRINTS E-class P450 group I signature 24 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151423g00010 426 PRINTS E-class P450 group I signature 333 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151423g00010 426 PANTHER CYTOCHROME P450 26 1 403 - -
Stsc151423g00010 426 SUPERFAMILY Cytochrome P450 2 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151423g00010 426 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 369 378 IPR017972 GO:0005506|GO:0016705
Stsc151423g00010 426 FunFam Cytochrome P450 85A1 1 425 - -
Stsc151423g00010 426 PRINTS P450 superfamily signature 294 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151423g00010 426 PRINTS P450 superfamily signature 367 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151423g00010 426 PRINTS P450 superfamily signature 238 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151423g00010 426 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151423g00010 426 Gene3D Cytochrome P450 1 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151423g00010 Stsc-Chr151423 41578 45530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151423g00010 44 426 Cytochrome P450 AT5G38970 62.240 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151423g00010 K09590 - gmx:100805958 670.233