Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151423g00006 ATGAGGCTTGTGATCTTAGTTCTTTGTGTCATTGTGTTGTTCTCCTATGCAGGTGCTTATGATCCTTTGGATCCAAATGGGAACGTAACAATCAAATGGGATATAGTTTCTTGGACTGCAGATGGCTATGTGGCCGACGTAACGTTGTACAACTTCCAAGTGTTCCGGCACATAATGAACCCCGGATGGACCATGGGATGGACATGGGCAAAGAAAGAAGTGATATGGTCAATGGTGGGAGCTCAAACGACAGAGCAAGGTGACTGCTCAAAGTTCAAAGGCAACATACCTCACTGCTGCAAGAAAATCCCAACAGTTGTGGACTTGCTCCCTGGTGTCCCTTACAACCAGCAATTCACAAATTGTTGTAAGGGTGGAGTTGTCGCCGCGTGGGGCCAAGACCCTTCACAGGCTGTCTCTTCATTCCAAATCAGTGTTGGCCAAGCTGGTACCTCCAACAAGACGGTTAAGCTCCCCAAGAATTTCACTCTCTTGGCTCCCGGACCGGGCTACACTTGCGGCCCGGCCAAGGTTGTTCCTTCCACCACTTTCCTTACTCAGGACAAGCGCCGCAAGACTCAAGCCCTGATGACATGGAATGTTACCTGCACATACTCACAATTTCTAGCAAGAAAGAACCCTGCTTGTTGTGTTTCTTTGTCATCCTTCTACAATGAAACTATTACTCCTTGTCCCTCTTGTGCATGTGGCTGCCAGAACAAAAAGAATTGTGTCAAGAGTGAGTCTAAAATTCTGAGCATGGTTGGTGTTCACACTCCAAAGAAAGACAATGAACCATTGATGCAGTGCACTCACCATATGTGTCCAATAAGGGTACATTGGCATGTGAAGCAAAACTATAAGGACTATTGGAGAGTCAAGATTGCCATAACAAATTTCAATTACAGGATGAATTATTCCCTCTGGACTCTTGCAATTCAGCATCCAAATCTCAACAATGTCACACAAGTCTTCAGCTTTGATTACAAGCCTATACTTCCCTATGAGTCCATAAATGACACTGGCATGTTCTTTGGCATGAAATACTACAATGATCTGTTAATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAAGTGCTTCTTCAGAAGGACAAGGACACATTCACATTCAAGCAAGGATGGGCTTTTCCAAGAAAAGTATACTTTAACGGTGATGAATGCATGCTTCCACCACCAGATTCCTATCCATTCCTCCCTAATTCTGCCCCTGCTACACTAAGTGCCTTCCCAGCACTCATTTTATCATTGATATTCTTGCTAGTTTTATGA 1293 0.4455 MRLVILVLCVIVLFSYAGAYDPLDPNGNVTIKWDIVSWTADGYVADVTLYNFQVFRHIMNPGWTMGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKIPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPSQAVSSFQISVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTTFLTQDKRRKTQALMTWNVTCTYSQFLARKNPACCVSLSSFYNETITPCPSCACGCQNKKNCVKSESKILSMVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKQNYKDYWRVKIAITNFNYRMNYSLWTLAIQHPNLNNVTQVFSFDYKPILPYESINDTGMFFGMKYYNDLLMEAGPTGNVQSEVLLQKDKDTFTFKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSAPATLSAFPALILSLIFLLVL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151423g00006 430 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Stsc151423g00006 430 PANTHER PROTEIN COBRA 6 423 IPR006918 GO:0010215|GO:0016020
Stsc151423g00006 430 PIRSF COBRA 1 430 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151423g00006 Stsc-Chr151423 24904 27114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151423g00006 19 430 COBRA Gene Family AT3G29810 66.990 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151423g00006 - - gmx:100798678 825.854