Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151423g00005 ATGTTGTCTTCTTCTTCCCTTCTCAACATCAAACCGCCTCCATGCATTTTCCTCTTCTTCTTCCTTCTCTCTTTCACTTCCTTCACTTCAACAGAAGCTTATGATGTGCTTGACCCAAACGGAAATATCACAATCAGATGGGATATCATAAGCTGGACACCAGATGGTTATGTTGCTGTTATCACATTAAACAATTTCCAACAATACCGTCATATCTCGCCGCCGGGCTGGTCACTAGGATGGACATGGGCAAAGAAAGAGGTCATTTGGAGCATGATGGGAGGGCAGACTACCGAACAAGGCGATTGCTCGAAATTCAAGGCAAGCCCCCCACCACATTGCTGTAAAAAGGATCCAACCGTTGTTGATTTACTTCCCGGAACACCTTACAATCAACAGATTGCGAATTGCTGCAAAGGTGGTGTACTTAGTTCATGGGCACAGGATCCAGTCAATGCCATTGCAGCATTTCAAATCAGTGTTGGTAGAGCTGGAACCTCTAACAGAACAGTCAAAGTGCCCAAGAACTTCACCTTGAAGGCTCCCGGACCGGGTTATACTTGCAGCCCGGGAAAAATTGTTCAACCTACTCAATTCTTAACAGGAGACAAAAGGAGAAGGACTCAAGCTCTCATGACATGGAATGTGACATGCATGTATTCACAATTTCTAGCTCAGAAAACTCCAACTTGCTGTGTTTCACTCTCATCTTTCTATAATGATACCATTGTACCATGCCCGACGTGTTCGTGTGGCTGCCAAGGCAACTCTTCTCAATCCGGGAACTGTGTAGATCCGGATACACCGCATTTGGCATCGGTCGTTGCTAACCCTGCTAAGAGTTCTCCTTTGGTTCAATGCACTCGTCATATGTGTCCTATCCGAGTTCATTGGCATGTTAAGATTAACTACAAGGAGTACTGGCGCGTGAAGGTTACTATTACTAATTTCAATTACAAGATGAACTATACAGATTGGAACTTGGTTATTCAACACCCGAACTTCGACAANNNNNNNNNNCTACAAGTCATTAACACCCTATGGCACAATAAATGA 1056 0.4384 MLSSSSLLNIKPPPCIFLFFFLLSFTSFTSTEAYDVLDPNGNITIRWDIISWTPDGYVAVITLNNFQQYRHISPPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKFKASPPPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPVNAIAAFQISVGRAGTSNRTVKVPKNFTLKAPGPGYTCSPGKIVQPTQFLTGDKRRRTQALMTWNVTCMYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCSCGCQGNSSQSGNCVDPDTPHLASVVANPAKSSPLVQCTRHMCPIRVHWHVKINYKEYWRVKVTITNFNYKMNYTDWNLVIQHPNFDXXXXLQVINTLWHNK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151423g00005 351 PIRSF COBRA 6 346 IPR006918 GO:0010215|GO:0016020
Stsc151423g00005 351 PANTHER PROTEIN COBRA 21 338 IPR006918 GO:0010215|GO:0016020
Stsc151423g00005 351 Pfam COBRA-like protein 57 221 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151423g00005 Stsc-Chr151423 22245 24793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151423g00005 21 336 COBRA Gene Family AT3G02210 75.862 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151423g00005 - - gmx:100783820 592.423