Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151423g00004 ATGATGGGAGGGCAGACTACCGAACAAGGCGATTGCTCGAAATTCAAGGCAAGCCCCCCACCACATTGCTGTAAAAAGGATCCAACCGTTGTTGATTTACTTCCCGGAACACCTTACAATCAACAGATTGCGAATTGCTGCAAAGGTGGTGTACTTAGTTCATGGGCACAGGATCCAGTCAATGCCATTGCAGCATTTCAAATCAGTGTTGGTAGAGCTGGAACCTCTAACAGAACAGTCAAAGTGCCCAAGAACTTCACCTTGAAGGCTCCCGGACCGGGTTATACTTGCAGCCCGGGAAAAATTGTTCAACCTACTCAATTCTTAACAGGAGACAAAAGGAGAAGGACTCAAGCTCTCATGACATGGAATGTGACATGCATGTATTCACAATTTCTAGCTCAGAAAACTCCAACTTGCTGTGTTTCACTCTCATCTTTCTATAATGATACCATTGTACCATGCCCGACGTGTTCGTGTGGCTGCCAAGGCAACTCTTCTCAATCCGGGAACTGTGTAGATCCGGATACACCGCATTTGGCATCGGTCGTTGCTAACCCTGCTAAGAGTTCTCCTTTGGTTCAATGCACTCGTCATATGTGTCCTATCCGAGTTCATTGGCATGTTAAGATTAACTACAAGGAGTACTGGCGCGTGAAGGTTACTATTACTAATTTCAATTACAAGATGAACTATACAGATTGGAACTTGGTTATTCAACACCCGAACTTCGACAANNNNNNNNNNCTACAAGTCATTAACACCCTATGGCACAATAAATGA 783 0.4393 MMGGQTTEQGDCSKFKASPPPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPVNAIAAFQISVGRAGTSNRTVKVPKNFTLKAPGPGYTCSPGKIVQPTQFLTGDKRRRTQALMTWNVTCMYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCSCGCQGNSSQSGNCVDPDTPHLASVVANPAKSSPLVQCTRHMCPIRVHWHVKINYKEYWRVKVTITNFNYKMNYTDWNLVIQHPNFDXXXXLQVINTLWHNK 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151423g00004 260 PIRSF COBRA 1 255 IPR006918 GO:0010215|GO:0016020
Stsc151423g00004 260 PANTHER PROTEIN COBRA 1 247 IPR006918 GO:0010215|GO:0016020
Stsc151423g00004 260 Pfam COBRA-like protein 1 130 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151423g00004 Stsc-Chr151423 22245 24793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151423g00004 1 245 COBRA Gene Family AT3G02210 77.823 7.02e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151423g00004 - - gmx:100783820 458.373