Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151423g00002 ATGAACTTGAAGAGTCATTGTAGGAAAACCTCGGTTATATCCACTCTCCTTTACCTTTATTTATTGTTCCTCTCCAACATAGCCATATCCATTGAAGCTTATGTTCCAGTTGATAGCTTCAGCATCAACTGTGGCTCAGCTGGCAAATCCTCCGATGGTCAGAGGTCATGGAAAGGAGACATAGACTCAAACCTCTTAACTACTCTTGAAGACACAAACACCATGGTTGCTCAACCAACCACACAAGCTTCTCCAAACCAAGTACCCTACACCACTGCCCGCTTGTCTAACTCTGAATTCAGTTATTCGTTCCCGGTCACACTTGGCCGCAAATTCGTACGTCTCTTCTTCTACCCTGCTTCTTACCCTGGCTTTGACCGTTATAACGCCGTCTTCACAGTCAAATCCGAGGGTTTCACACTCCTCAAGGATTTCAATGCTTCGCTTAATGCCGATGATGCAAACAGCGACACCATATTTAAAGAGTACATAATCAACGTGGTTTCCATGCCCACTGATCTCTACTTCACTGAACCCACTGCACAACAAATCATATTTGTGGGTAATCCAGACGCCCCATACAATATGGAAAACAAAAGCGCCCTGGAGACAGATTATAGAATCAATGTTGGCGGCAACACAATCGCTCCTAAAGGCGACACTGGCATGCTCCGGAACTGGGCAGGAGATGATGCTGATTATTTAACAACCCCAACCGATTTCTATCAACAACAAGCGATTAAAGAAACGCAAGAATTCCTCTTCTTGCTCGCTTCCCCTCACTCTTCTCACTTCTCACCAATGGCCTCTTCCAATGCTCGCGGCACCACCAACTCCTTCGGTCACTCTGAGATTAACTGGGACAAGCTTGATAAAACGAAGTTCTATGTTGTTGGTGCTGGGCTCTTTACGGGCGTTACGGTGGCTCTATACCCGGTTTCTGTTGTAAAAACTAGGATGCAGGTTGCTACAAGGGATACTGTGGAGAGGAATGCGTTTTCTGTGGTGAAAGGGCTACTTAAGACGGATGGCATTCCTGGTTTGTATAAAGGGTTCGGCACAGTTATCACCGGAGCAATTCCTGCTAGGATCATATTCCTCACTACATTAGAAACCACGAAGGTGGCTGCCTTCAAGATGCTTGAGCCGTTTACACTGTCTGAAACTACCCAGGCTGCCATAGCGAATGGAGTTGCGGGCATGACATCATCGCTTTTTTCACAAGCTGTGTTTGTACCAATTGATGTGATTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGGCATACCCAATATAGTGGGGGTCTAGATGTTGTTCGGAAGGTGTTAAGGGCTGATGGCATCAGGGGATTATATAGGGGGTTTGGTCTATCTGTTATGACTTATTCGCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCAAGCCAACGGTTCATATGGAGAGCCTTGGGACATAGTGTCGAAAATGAGGAAGGCACTCCTAGTTTGCCAAAGATTGTATTAGTTCAGGCTACTGGAGGGATTATTGCTGGTGCAACTGCATCCTGCATTACAACTCCATTGGATACTATCAAGACACGGTTACAGGTTATGGGACATGAAAAGAGAACTTCTGTAAAACAAGTTGTGAGAGACTTAATCAGTGAGGATGGTTGGAAAGGTCTATATAGAGGTTTGGGCCCAAGATTTTTCAGCATGTCAGCATGGGGTACTTCAATGATACTAGCTTATGAATATTTGAAGCGTTTATGTGCAAAAGATGAATAG 1770 0.4514 MNLKSHCRKTSVISTLLYLYLLFLSNIAISIEAYVPVDSFSINCGSAGKSSDGQRSWKGDIDSNLLTTLEDTNTMVAQPTTQASPNQVPYTTARLSNSEFSYSFPVTLGRKFVRLFFYPASYPGFDRYNAVFTVKSEGFTLLKDFNASLNADDANSDTIFKEYIINVVSMPTDLYFTEPTAQQIIFVGNPDAPYNMENKSALETDYRINVGGNTIAPKGDTGMLRNWAGDDADYLTTPTDFYQQQAIKETQEFLFLLASPHSSHFSPMASSNARGTTNSFGHSEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRMQVATRDTVERNAFSVVKGLLKTDGIPGLYKGFGTVITGAIPARIIFLTTLETTKVAAFKMLEPFTLSETTQAAIANGVAGMTSSLFSQAVFVPIDVISQKLMVQGYSGHTQYSGGLDVVRKVLRADGIRGLYRGFGLSVMTYSPSSAVWWASYGSSQRFIWRALGHSVENEEGTPSLPKIVLVQATGGIIAGATASCITTPLDTIKTRLQVMGHEKRTSVKQVVRDLISEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDE 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151423g00002 589 Gene3D Mitochondrial carrier domain 296 589 IPR023395 -
Stsc151423g00002 589 ProSiteProfiles Solute carrier (Solcar) repeat profile. 292 376 IPR018108 -
Stsc151423g00002 589 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 277 588 - -
Stsc151423g00002 589 FunFam Mitochondrial substrate carrier family protein 296 588 - -
Stsc151423g00002 589 ProSiteProfiles Solute carrier (Solcar) repeat profile. 391 479 IPR018108 -
Stsc151423g00002 589 Gene3D - 39 193 - -
Stsc151423g00002 589 Pfam Mitochondrial carrier protein 394 481 IPR018108 -
Stsc151423g00002 589 Pfam Mitochondrial carrier protein 301 378 IPR018108 -
Stsc151423g00002 589 Pfam Mitochondrial carrier protein 504 588 IPR018108 -
Stsc151423g00002 589 SUPERFAMILY Mitochondrial carrier 288 581 IPR023395 -
Stsc151423g00002 589 ProSiteProfiles Solute carrier (Solcar) repeat profile. 499 584 IPR018108 -
Stsc151423g00002 589 FunFam FERONIA receptor-like kinase 39 186 - -
Stsc151423g00002 589 Pfam Malectin domain 40 166 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151423g00002 Stsc-Chr151423 8526 13875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151423g00002 285 589 Chloroplast and Mitochondria Gene Families AT5G15640 75.896 3.00e-170 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151423g00002 K15121 - qsa:O6P43_009187 544.658