Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151418g00006 | ATGGGAAGAAAAAGAAGAAGATCCTCTGTTTTCTACTCTGTTTTCTTCTTCGTCTCTGTTCTCTGTTTTCACTCTCAACTTGCAACCTCAGAGGACGATTCCGAAGCGCTTCTGGCACTGAAATCTTCCATAGACGCACACAACAAGCTTCCATGGCGACCAGGGAGCGATGTGTGCACGTGGCAAGGTGTCAAAGACTGCTTCAATGGAAGGGTAAGAAAGCTCGTTATAGAATATTCCAACCTCACGGGAACTTTAGAATCGAAGATCTTGAACCGTTTGGATCAGCTTCGAGTTCTAAGCTTCAAAGGGAACTCACTCTCTGGTCAAATTCCAAACCTTTCAAGCTTAGTTAACCTCAAATCGATTTTCCTCAACGACAACAACTTCTCCGGCGAGTTTCCGGCGTCTATTTCCGACCTCCACCGTGTAAAAGTCATAGTTTTGTCAGGGAACAGAATCTCCGGCGAAATTCCGGCGTCGTTGCTGAATCTCCGGCGACTCTACATACTCTACTTGGAGGACAACTTGTTCACCGGGAAAATCCCGGGGTTCAACCAGACAAGTCTCAGGTACCTTAATGTTTCGAATAACAAACTTTCCGGCGAGATTCCGGCGACTCCGGCATTGGTACGGTTCAATGCATCTTCATTTTCCGGCAACACTAATCTCTGCGGCGACCAAGTGCACGTGCCATGCAAAAGTAACATCCTTTTGCCTCCTTCTATGAGCCCAAGCTCTTCCATGGTTCCAACAAAGAAGAAAACATCATCGAACCGCACGAAACTGATCAAGATTATTGGAGGAACCGTGGGTGGTGTTGTTTTGTTGCTCATTGTTTTGGTTCTTGTGTTCTTCACGGTTTGTAGAAACCGTAGGAAGAGTGTGAGTGGTGGAGCTAGAAGGAAAGGAAATGGGGTTGGGAGTGTGGAGGAAGTTGAAGATGTTGGCAGCGGCGGAGGCGGTGGTGGCGGCGGCGGAGGTGGCAGCAGTGGTAACAATGAAGGGAAACAAGGTGGTTTTGCATGGGAAGGTGAGGGTCTAGGGAAGTTGGTGTTCCTTGGAGCAGGGGATAATAGGGAAATAATGAGTTACACATTAGAGGATTTGCTTAAGGCTTCAGCTGAGACACTTGGGAGGGGCATTATGGGAAGTACATATAAGGCAGTTATGGAATCAGGGTTCATTGTGACTGTTAAGAGATTGAAGGATGCAAGGTACCCTAATTTGGATGAGTTTAAGGCTCATATTGAAGTTCTTGGTAGGCTTAGGCACCCTAATTTGGTCCCACTTAGGGCTTATTTTCAAGCTAAGGAAGAAAGGCTTCTTGTTTATGATTACTTCCCTAATGGCAGCCTCTTCTCTCTCATTCATGGATCGAAAACATCCGGCGGAGGAAAGCCTCTTCACTGGACATCCTGCCTCAAAATCGCCGAAGATCTCGCGACCGGGCTTCTCTACATCCACCAAAACCCCGGCTTAACTCATGGAAACCTCAAATCTTCTAATGTCTTGTTGGGTTCAGACTTTGAGTCCTGTCTTACTGACTATGGCCTCACAATGTTCCTTAACCCTGACTCAATGGATGAACCAAGTGCTACCTCTTTATTCTACCGAGCACCCGAATGCCGAAGCTTCCAGAGATCTCACACTCAACCGGCCGATGTATACAGCTTCGGAGTCCTTCTCCTCGAACTCTTAACAGGAAAAACACCCTTCCAAGACCTTGTCCAGGAACACGGCTCGGATATACCTAAATGGGTTAAATCGGTGCGCGAGGAAGAGACAGAGTCCGGGGACGATCCTTCCTCGGGCAATGAAGCATCCGAAGAGAAGCTTCAAGCTCTCTTGAACATTGCAATGGCATGTGTTTCGCTGGTGCCGGAGAATCGGCCGACCATGAGGGAAGTTCTGAAGATGATAAGAGACACAAGAGGGGAAGCTCAGGTATCTTCAAATAGTAGTGATCATTCACCAGGTAGATGGTCAGATACAGTTCAAAGCTTTCCAAGGGAAGAACACTTGAGCATATGA | 2034 | 0.4735 | MGRKRRRSSVFYSVFFFVSVLCFHSQLATSEDDSEALLALKSSIDAHNKLPWRPGSDVCTWQGVKDCFNGRVRKLVIEYSNLTGTLESKILNRLDQLRVLSFKGNSLSGQIPNLSSLVNLKSIFLNDNNFSGEFPASISDLHRVKVIVLSGNRISGEIPASLLNLRRLYILYLEDNLFTGKIPGFNQTSLRYLNVSNNKLSGEIPATPALVRFNASSFSGNTNLCGDQVHVPCKSNILLPPSMSPSSSMVPTKKKTSSNRTKLIKIIGGTVGGVVLLLIVLVLVFFTVCRNRRKSVSGGARRKGNGVGSVEEVEDVGSGGGGGGGGGGGSSGNNEGKQGGFAWEGEGLGKLVFLGAGDNREIMSYTLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPNLDEFKAHIEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTMFLNPDSMDEPSATSLFYRAPECRSFQRSHTQPADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPKWVKSVREEETESGDDPSSGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDTRGEAQVSSNSSDHSPGRWSDTVQSFPREEHLSI | 677 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151418g00006 | 677 | Gene3D | Ribonuclease Inhibitor | 187 | 236 | IPR032675 | - | |
Stsc151418g00006 | 677 | Pfam | Protein kinase domain | 375 | 639 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc151418g00006 | 677 | ProSiteProfiles | Protein kinase domain profile. | 372 | 650 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc151418g00006 | 677 | Gene3D | Phosphorylase Kinase; domain 1 | 356 | 447 | - | - | |
Stsc151418g00006 | 677 | Pfam | Leucine rich repeat | 119 | 177 | IPR001611 | GO:0005515 | |
Stsc151418g00006 | 677 | SUPERFAMILY | Protein kinase-like (PK-like) | 376 | 652 | IPR011009 | - | |
Stsc151418g00006 | 677 | FunFam | Nuclear pore complex protein NUP107 | 30 | 184 | - | - | |
Stsc151418g00006 | 677 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 18 | 647 | IPR046959 | - | |
Stsc151418g00006 | 677 | MobiDBLite | consensus disorder prediction | 645 | 677 | - | - | |
Stsc151418g00006 | 677 | Pfam | Leucine Rich Repeat | 189 | 206 | IPR001611 | GO:0005515 | |
Stsc151418g00006 | 677 | Gene3D | Transferase(Phosphotransferase) domain 1 | 448 | 664 | - | - | |
Stsc151418g00006 | 677 | MobiDBLite | consensus disorder prediction | 296 | 339 | - | - | |
Stsc151418g00006 | 677 | Gene3D | Ribonuclease Inhibitor | 30 | 186 | IPR032675 | - | |
Stsc151418g00006 | 677 | MobiDBLite | consensus disorder prediction | 646 | 677 | - | - | |
Stsc151418g00006 | 677 | MobiDBLite | consensus disorder prediction | 587 | 609 | - | - | |
Stsc151418g00006 | 677 | Pfam | Leucine rich repeat N-terminal domain | 31 | 64 | IPR013210 | - | |
Stsc151418g00006 | 677 | SUPERFAMILY | L domain-like | 30 | 225 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151418g00006 | Stsc-Chr151418 | 31559 | 36744 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151418g00006 | 8 | 677 | Receptor kinase-like Gene Family | AT1G60630 | 61.891 | 0.0 | 786 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Stsc151418g00006 | Pkinase | 7.1e-37 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151418g00006 | - | - | gmx:100820186 | 956.822 |