Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151418g00002 ATGATTTACTCCCTTGAATACTTTGCTTTATTTGCAGCCATCATCTCATTCGTTTCCTTCCACATTTGGAGGATCAATCGAAACTTACCTATTCCAAATTTGCCTTTACTTGGTATGATACCATCTATTTTGTTTAATGTCTCCAATATTCATGAATATGCTACCACAGCTTTGAAACACTATGGAGGTACCTTTAAGGTTAGAGGACCATTGTTCACAAACATCAACTTTTTAATCACTAGTGATCCTATGAATCTGCACCATGTTACAAGTAAGAACTTTGTCAACTATGGCAAAGGTTCTGAGTTCCATGAGATTTTTGATATTCTTGGAGATGGGATCTTTAATTCTGATTCACAAAAGTGGAAGTACCAGAGGAACTTATTACAATCACTCTTTAAGCAAAACATCTTTGAGAACTTTGTTAGAAAAGTCATTCATAAGAAACTAGACGGTTTCCTACTTCCACTTTTGAATGAAGTTTCAGAATCAAGAAATGTCATGGACTTGCAAGATATCTTTCAAAGGTTCACTTTTGATAGCATTTGCTCCATAGTGTTGGCATTTGATCCCAATTGCCTTCCCAACAAGCTCACTCAATTCCCTGAGGTTGCTGCTGAGAAAGCTTTCAACAAAACGGAGGATGCAATTCTCTATAGACACCTCGTTCCAAGATGGTTCTGGAAGTTGCAGAGATGGCTCCGAATTGGACATGAGAAGGACTCCATTGCTTGCCAACAAATTCTTGACAAATTCTTACGTGATCGAATATCATCCAGTCAAGAGGAGAAAAGTAGATTCAACTACACGAAAGATGATGAATCAAACTTCGACATGCTTAAAGCTCTTGTGGAGAAAAGTGGAATGGAACAAGTAGATCACAAGTTTCTAAGAGACACTGCAATTAATCTCTTAGCAGCTGGAAGGGACACAATTAATTCAACTTTCTGTTGGTTTTTCTGGCTTGTTTCAACTCACCCTAACGTTGAAACCAAGATCCTTGGAGAAATCAAAGCAAACTTTAAAACTAATGAAGAAAATTGGTTTATTTCAGGGATGGAAGACCTTGACAAACTAATTTACTTGCATGGAGCTATATGTGAAGCTCTCAGGCTTTTCCCACCAGTGCCATTTGAGCACAAATGTGCAATCAAATCTGATATACTTCCAAGTGGAGATCGTGTTGATGCAAATACTATGGTGCTTTACTCCATATACTCAATGGGAAGAATGGAACAAATATGGGGAAATGATTGCTTGGAGTTTAAGCCTGAAAGGTGGATTTCGGAAAAAGGAATGAATATACAGGTACCATCATACAAGTTCATGGCTTTTAATGCTGGTCCCAGAAGTTGTTTGGGAAAAAATATAAGCTTTATCCAGTTGAAGATCATTGCCATTGCTTTGCTGTGGAACTTTGAGTTCCAAGTGGTGGAAGGGCATTCAGTGTGTCCAAGTGTTTCTATTATTCTGCACATGAAGCATGGGTTGCAAGTCAGGGTTACTAAAAGAAGCAACTGA 1521 0.3813 MIYSLEYFALFAAIISFVSFHIWRINRNLPIPNLPLLGMIPSILFNVSNIHEYATTALKHYGGTFKVRGPLFTNINFLITSDPMNLHHVTSKNFVNYGKGSEFHEIFDILGDGIFNSDSQKWKYQRNLLQSLFKQNIFENFVRKVIHKKLDGFLLPLLNEVSESRNVMDLQDIFQRFTFDSICSIVLAFDPNCLPNKLTQFPEVAAEKAFNKTEDAILYRHLVPRWFWKLQRWLRIGHEKDSIACQQILDKFLRDRISSSQEEKSRFNYTKDDESNFDMLKALVEKSGMEQVDHKFLRDTAINLLAAGRDTINSTFCWFFWLVSTHPNVETKILGEIKANFKTNEENWFISGMEDLDKLIYLHGAICEALRLFPPVPFEHKCAIKSDILPSGDRVDANTMVLYSIYSMGRMEQIWGNDCLEFKPERWISEKGMNIQVPSYKFMAFNAGPRSCLGKNISFIQLKIIAIALLWNFEFQVVEGHSVCPSVSIILHMKHGLQVRVTKRSN 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151418g00002 506 PANTHER CYTOCHROME P450 22 499 - -
Stsc151418g00002 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Stsc151418g00002 506 Gene3D Cytochrome P450 19 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151418g00002 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151418g00002 506 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151418g00002 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151418g00002 506 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151418g00002 506 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151418g00002 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151418g00002 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151418g00002 506 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151418g00002 506 Pfam Cytochrome P450 32 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151418g00002 506 SUPERFAMILY Cytochrome P450 31 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151418g00002 506 CDD CYP86A 65 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151418g00002 Stsc-Chr151418 8337 9857 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151418g00002 31 506 Cytochrome P450 AT2G23180 44.421 4.34e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151418g00002 - - gmx:100791312 576.244