Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151415g00002 ATGAAGAGTAGTGAAGAAGAGGACTGCTCTCTCATCATCGTCAAAGCTTCATCACCAACTCTTCTAACTATGTCACCATCATCATCTTCTTCCTCCTCCTCATCTCTAGTTAGCAGTGTTGTTGATAACAACGTCAACCAGGCTTCATCATCAAGAGGTATAAGCTTGAAGGCACCAATGGTTAGGCCTTATGTAAGATCCAAAATGCCTCGCCTTCGTTGGACTCCAGATCTCCACCGTTGCTTCGTGCATGCAGTTCAAACGCTTGGTGGAGAAGATAGGGCAACGCCAAAGTTGGTTTTGCAGCTAATGAATGTTAAGGGCCTTACCATATCTCACGTTAAAAGCCACCTACAGTTAGTTAATTTGAAGGTTGAAGTAATTTTACAGATGTACAGGAGCATGAAGCAGGAGCAGATGAATCAAGCGGCAAGGAAGAATAATAATAATGAAAAGAAGGCATCACAAGAATTCGTGGTTTCTTCATTATTGTCGCCATCAAGCATTGAAGCCAGGTGGTATGGTCAAGGGAGCCATGGAACTCATTATACCGAACAATTTGCTCGCACCAAACTCCAAGCTCAATGGAATGATGTGCAGCAAGAGTCTCAGTCTCACAACTATGCAAAGCAAGGGAGTGATGAGTCGATTATAGTTTGTAACCGCAATGATGAACAGGAGAAGACTCACACTTACATCATCTTTCAAGATATTCTCACACCTCACACTTCCCAAGGGAAGCAGGATGGTGGTGGTGGAAAGGTAGTGTCATCATCAGAAGGTGGTACAAGTAGTAGTAGATACAAAAACAAAGAGCATCAAATATTGGAAGATGCAAGCGCGATAGGAAAGAGAGTGAGTGTGTGTGATGAAGAAAACAAGATGCTGTCTCTGTCACTGATGATGATGAGTAGTCCAGTTAGGAATGATATCTCCCTTGAGCTCAACCTCTCTTAA 957 0.4295 MKSSEEEDCSLIIVKASSPTLLTMSPSSSSSSSSSLVSSVVDNNVNQASSSRGISLKAPMVRPYVRSKMPRLRWTPDLHRCFVHAVQTLGGEDRATPKLVLQLMNVKGLTISHVKSHLQLVNLKVEVILQMYRSMKQEQMNQAARKNNNNEKKASQEFVVSSLLSPSSIEARWYGQGSHGTHYTEQFARTKLQAQWNDVQQESQSHNYAKQGSDESIIVCNRNDEQEKTHTYIIFQDILTPHTSQGKQDGGGGKVVSSSEGGTSSSRYKNKEHQILEDASAIGKRVSVCDEENKMLSLSLMMMSSPVRNDISLELNLS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151415g00002 318 SUPERFAMILY Homeodomain-like 68 125 IPR009057 -
Stsc151415g00002 318 MobiDBLite consensus disorder prediction 242 272 - -
Stsc151415g00002 318 NCBIfam myb-like DNA-binding domain, SHAQKYF class 70 123 IPR006447 GO:0003677
Stsc151415g00002 318 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 43 221 IPR046955 GO:0003700
Stsc151415g00002 318 MobiDBLite consensus disorder prediction 242 265 - -
Stsc151415g00002 318 Pfam Myb-like DNA-binding domain 72 119 IPR001005 -
Stsc151415g00002 318 Gene3D - 69 137 - -
Stsc151415g00002 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 126 IPR017930 -
Stsc151415g00002 318 FunFam Myb family transcription factor 68 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151415g00002 Stsc-Chr151415 3305 5341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151415g00002 61 120 G2-like Transcription Factor Family AT1G14600 78.333 2.20e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc151415g00002 Myb_DNA-binding 6.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151415g00002 - - adu:107482892 267.7